Yersinia mollaretii: HRD69_03240
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Entry
HRD69_03240 CDS
T06716
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
ymo
Yersinia mollaretii
Brite
KEGG Orthology (KO) [BR:
ymo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ymo03019
]
HRD69_03240 (csrD)
Messenger RNA biogenesis [BR:
ymo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HRD69_03240 (csrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
QKJ02097
LinkDB
All DBs
Position
complement(742390..744018)
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AA seq
542 aa
AA seq
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MRFTTKFSAFMTLLVVLAMCLVLLGSTASFFYYARSLYAVAIMSLAALVIVLTLWLSFRW
LREQTAGQEKLEWRAKRILNGEREHAVRSEGHEWPPCASRAIDHLLAELIEVRAERNRVD
TLIRTFAAQDAKTGFSNRQFFDNQLTTQLEESGAHGVVMMVQLPDFDRLNETDDHQLVQE
LMHSLINMLSTFVARHPSALLARYHQHEIAILLPHKTLKYADVMAAQLVHAIGTLPEPHV
IDRESLLHIGIVAYRGGESAEQIMDNARQATRNAAMYGGNGWYVFDTQVTERGRGSVKWR
TLLEQTLESGGPRLYQRPVITVDGKIHHREVISRIFDGKQELLAAEFTPLVQLFGLAERY
DRQKIDRIIPLLSLWPDETLAFSICVDSLLQRPFQRWLRDTLLQCKKSDRTRIIFELAEA
DVCQHIDRIRPMIRLLLGIGCKVMVSQAGLTVVSTSYIKSLRIEMIKLHPGLVRNINLRY
ENQLFVESLTGACAGAQAKVFAAEVLTREEWQTLKEKGIYGGQGNFFAPPTPLNPGKKKY
SY
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttacaaccaaattttctgcgtttatgacactgctggtcgtattggccatgtgt
ttggtgctactgggtagcacggcaagtttcttctattatgctcgttctctttatgcggtg
gcgattatgtcgctggccgcgctggtgatcgtgctaacactatggctgagttttcgttgg
ctgcgagagcagactgcgggtcaggagaaactggagtggcgagcaaaacgtattttgaat
ggtgaacgtgaacacgcagttcgcagcgaaggccacgaatggcccccctgtgccagccgt
gccattgatcatttattggctgagctgatagaagtgagggcggagcgtaaccgtgtcgat
acactgattcgcacgtttgcggcacaggatgccaagaccggcttcagtaatcgccagttt
tttgataatcaactgaccacgcaactggaagagtccggcgctcacggcgtggtcatgatg
gtacagttgccggactttgaccgcttaaatgaaacagacgatcatcaactggtacaagag
ctgatgcattcgctgattaacatgctttctacctttgttgcccgccatccctccgcatta
ctggcgcgttaccatcaacatgagattgccatcttactgccacataaaactctaaaatat
gctgatgttatggccgcacaactggtccacgcgatcgggacgttacccgaacctcatgtt
attgaccgtgaatcgttgctgcatattgggattgtggcgtaccgcggtggcgaatcagcc
gaacagataatggataatgcgcgacaagcgaccagaaatgcggcgatgtatggcgggaat
ggttggtatgtcttcgatactcaagtgacggaaagagggcgtggcagtgtcaaatggcgt
actttattggaacaaacactggagagcggaggcccacggctctatcaacgcccggtgatt
actgttgacggtaagattcatcaccgtgaggtcatcagtcgtatatttgatggtaaacag
gagttgctggcggctgagtttacccccttggtgcaattgtttggcttagctgaacgctat
gaccgccaaaagattgatcggataattcctttattatctttatggccggacgaaactctg
gcattttctatctgcgttgattcattattgcagcgtcctttccagcgttggctgcgggat
acgctactgcaatgcaaaaaatcggatagaacgcgaattatctttgaacttgcagaggca
gatgtgtgtcaacatatcgaccgaatccgcccgatgatacgtttattgctcggcataggc
tgcaaggtgatggtgtcgcaggccggattgacggttgtcagcacctcttatatcaagtct
ctgcggattgaaatgatcaagcttcatccgggattagtcagaaatattaatttacggtat
gagaatcagttgtttgtagaaagtcttaccggtgcttgtgcaggcgcacaggcaaaagtt
tttgctgcggaagtgcttacccgtgaagagtggcaaactctgaaagagaaagggatttat
ggtggacagggcaatttttttgctccaccgacgcctttgaatcccggaaagaaaaaatat
tcgtattag
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