Yersinia mollaretii: HRD69_03855
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Entry
HRD69_03855 CDS
T06716
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
ymo
Yersinia mollaretii
Pathway
ymo00860
Porphyrin metabolism
ymo01100
Metabolic pathways
ymo01110
Biosynthesis of secondary metabolites
ymo01120
Microbial metabolism in diverse environments
ymo01240
Biosynthesis of cofactors
Module
ymo_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
ymo_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
ymo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
HRD69_03855 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ymo04147
]
HRD69_03855 (hemB)
Enzymes [BR:
ymo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
HRD69_03855 (hemB)
Exosome [BR:
ymo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
HRD69_03855 (hemB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
QKJ02196
LinkDB
All DBs
Position
complement(882734..883756)
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AA seq
340 aa
AA seq
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MSYAFPGTFPGRRMRRVRRHDFSRRLVAENQLTVNDLIYPVFVMEGANQQQAVSSMPGVS
RMTIDLLIKEAEAIAKLGVPVISLFPVIESGSKSLHAEEAYNPNGLVQRTVRALKDAVPE
LGILTDVALDPYTTHGQDGVIDADGYVINDITKEILVRQALSHAEAGAEIIAPSDMMDGR
IGAIRDQLELQGLVNTQIMAYSAKYASCYYGPFRDAIGSSSNLKGGNKKTYQMDPANSDE
ALQEIAQDLQEGADMVMVKPGMPYLDVVRRVKDTFGVPTFAYQVSGEYAMHMAAIQNGWL
QEKPTVMESLLCFKRAGADGVLTYFAKQVAQWLHDDQMQR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgcattccccggcacctttcctggtcgccgtatgcgccgtgtgcgccgtcat
gatttcagccgtcgtctggtcgctgaaaatcagctgacagtcaatgacctgatctatccg
gtgtttgtcatggagggggcgaaccagcagcaagcggtatcatcaatgccgggtgtttcg
cgcatgacgatagatcttctgataaaagaggcagaggccattgccaagcttggtgtccca
gtcatatcgttgttcccagtcatcgagtctggttcgaaatcattgcacgcggaagaagct
tataacccgaatggtttggtgcaacgcaccgtgcgcgcattaaaagacgcagtaccagaa
ttagggattcttaccgatgtcgctctcgatccctacactacccatgggcaagatggcgtg
attgatgctgatggctatgtcattaatgacattacgaaagagattttagtgcgtcaggca
ttatcacacgctgaagctggcgctgagattatcgccccgagcgatatgatggatggccgt
atcggcgcgattcgcgatcagttggaactacaaggcctagtgaatacacaaatcatggca
tattcagcgaaatatgcctcttgttactatggcccattccgcgatgctattggctccagc
agtaatttgaaagggggtaataaaaaaacctaccaaatggaccccgctaacagtgatgaa
gctttgcaagagatagcgcaggacttgcaggaaggcgctgatatggtgatggtgaagcct
ggaatgccttatcttgatgttgtgcgtcgggtgaaagacacctttggtgtgccaaccttt
gcctatcaggtctcgggtgaatatgctatgcacatggctgccattcagaatggctggctg
caagaaaaaccaacggtgatggagtcactattgtgctttaaacgtgcgggtgcggatggg
gtattaacctatttcgcgaagcaggtggcgcaatggttacatgatgatcaaatgcagcgt
taa
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