Yersinia mollaretii: HRD69_04955
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Entry
HRD69_04955 CDS
T06716
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ymo
Yersinia mollaretii
Pathway
ymo00541
Biosynthesis of various nucleotide sugars
ymo01100
Metabolic pathways
ymo01250
Biosynthesis of nucleotide sugars
Module
ymo_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
ymo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HRD69_04955 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ymo01005
]
HRD69_04955 (rfaD)
Enzymes [BR:
ymo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
HRD69_04955 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
ymo01005
]
Core region
HRD69_04955 (rfaD)
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Ortholog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
QKJ02391
LinkDB
All DBs
Position
1126886..1127818
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNNIGYKDILVVDNLKDGTKFVNLVDLDIADYMDKEDFVASI
VAGDDMGDIDAIFHEGACSSTTEWDGKYVMDNNYQYSKDILHFCLDRGIPFLYASSAATY
GGRTDNFIEDRQYEKPLNVYGYSKFLFDQYVREILPQADSQICGFRYFNVYGPREGHKGS
MASVAFHLNNQINAGENPKLFSGSENFKRDFIYVGDVADVNLWFWQNGVSGIFNCGTGRA
ESFQAVADAVVDFHQSGPVEYIEFPEKLKGRYQAYTQADLTNLRAAGYDKPFKTVAEGVK
EYLAWLNRPI
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtcactggcggcgccggcttcattggcagcaacattgttaaagcactgaat
aatataggttataaagatattctggtcgtggataacctgaaagacggcactaaattcgtc
aatctggtggatctggatattgcggattacatggataaagaagattttgttgccagtatc
gttgccggtgacgatatgggtgatattgacgcgatcttccacgaaggtgcctgctcctcc
accaccgagtgggatggcaagtacgtcatggataacaactatcagtactcaaaagatatc
ctgcacttctgtctggatcgcggtattcctttcttgtacgcctcctctgcggccacttat
ggcggacgcactgataacttcatcgaagatcgtcagtacgaaaaaccacttaacgtatat
ggttactccaagtttttattcgatcagtatgtgcgtgagatcctgccgcaagctgattcg
caaatttgtggattccgctacttcaatgtttatggcccacgcgaaggccacaaaggcagc
atggcgagtgtggctttccacctgaataatcagattaatgcaggtgaaaatcctaagctg
ttctccggcagtgaaaacttcaaacgcgacttcatctatgtgggtgatgtcgctgacgtt
aatttgtggttctggcaaaacggcgtctccggtattttcaactgcggcacaggtcgcgcg
gaatccttccaggctgtcgccgatgcggtggtcgatttccaccaaagcgggccagtggaa
tacattgaattcccagaaaaactgaaaggccgttatcaggcatacacgcaagccgacctc
actaatttgcgtgccgctggttatgacaagccgttcaaaaccgtcgccgaaggcgtcaaa
gagtatctggcgtggctcaatcgcccgatctaa
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