Yersinia mollaretii: HRD69_05285
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Entry
HRD69_05285 CDS
T06716
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ymo
Yersinia mollaretii
Pathway
ymo03030
DNA replication
ymo03410
Base excision repair
ymo03420
Nucleotide excision repair
ymo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ymo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HRD69_05285 (polA)
03410 Base excision repair
HRD69_05285 (polA)
03420 Nucleotide excision repair
HRD69_05285 (polA)
03440 Homologous recombination
HRD69_05285 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ymo03032
]
HRD69_05285 (polA)
03400 DNA repair and recombination proteins [BR:
ymo03400
]
HRD69_05285 (polA)
Enzymes [BR:
ymo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HRD69_05285 (polA)
DNA replication proteins [BR:
ymo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HRD69_05285 (polA)
DNA repair and recombination proteins [BR:
ymo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HRD69_05285 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HRD69_05285 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Obc1_cap
Prok-E2_E
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QKJ02452
LinkDB
All DBs
Position
complement(1208619..1211417)
Genome browser
AA seq
932 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNGSGEPTGAMYGVLNMLRSLLLQYRPSHVAV
VFDAKGKTFRDELFAEYKSHRPPMPDDLRSQIEPLHQMVKAMGLPLLVVSGVEADDVIGT
LAQEAEKAGHSVLISTGDKDMAQLVTPNITLINTMNNAILGPQEVCEKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDSLFSNLDKIPTLTFRGAKTMSAKLEQNK
DVAYLSYKLATIKTDVELDVTCDELTVSPPDDEQLHQLFSRYEFKRWLADVEEGKWLDGK
KERPTGQTSNKTFVATEPAPAAEVTAVLSQENYHTILDEKSLADWIERLKKADVFAFDTE
TDGLDTLSNNLIGLSFAVAPGEAAYLPLAHDYLDAPAQLDRDWVLATLKPLLEDDKALKV
GQNLKFDQSMLARYGIELRGIAFDTMLESYVLNSVAGRHDMDSLAERYLNHKTITFEEIA
GKGKNQLTFNQIALEQAGPYASEDADVTLQLHLVLWPKLQESEGLKRVFQEIEMPLLPIL
SRIERTGVLIDQNILAAHSKELTIRLDELEKQAHELAEEPFNLASPKQLQVILYEKQKLP
ILKKTPGGAASTNEEVLAELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPVSGRVHT
SYHQAVTATGRLSSRDPNLQNIPVRNEEGRRIRQAFIAPQGYRIMAADYSQIELRIMAHL
SQDEGLLTAFAAGKDIHRATAAEVFGLPLEKVTSEQRRSAKAINFGLIYGMSAFGLARQL
NIPRGEAQRYMDLYFERYPGVLEYMERTRKQAADQGYVTTLDGRRLYLPDIHSRNANRRK
AAEREAINAPMQGTAADIIKRAMIAVDAWLQQEPEPLVRVIMQVHDELVFEVHESVLESA
EQKIRELMEQSMQLAVPLKVDVGVGDNWDQAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattgcagaaaacccattgatcctcgttgacggttcctcttacctctatcgc
gcttaccatgccttcccaccgttgaccaatggcagcggcgaaccgacaggcgcgatgtat
ggcgtgttgaacatgttgcgcagtctgttgctgcaatatcgtccaagccatgttgcggtt
gtttttgatgctaaaggcaaaacatttcgtgatgagttattcgctgaatataaatctcac
cgcccaccgatgcccgatgatttacgatcgcaaatagagccgcttcaccaaatggtcaag
gcgatgggattgcctttattggtggtttctggggtcgaggcggatgatgttattggcact
ctggcgcaagaagcagaaaaagcaggtcattccgtattaattagtaccggtgataaagat
atggcgcaattagttacgccgaatatcactctcattaatacaatgaacaacgctatttta
gggccacaggaagtgtgcgaaaaatatggcgttccccctgaactgattattgattttctg
gccctgatgggagattcatcagacaatattccaggcgtacccggtgtgggtgaaaagacc
gcgcaggctttattgcaaggtctgggcggattggactcgctattcagtaatttggataaa
atacccacactaacattccgtggcgctaaaacgatgtctgccaaattagagcagaataaa
gatgtcgcctacctctcttataaactcgccaccattaaaacggatgtcgaactggatgtc
acttgcgacgagttgaccgtctcaccgccggatgatgagcagttgcatcagttattcagc
cgctatgaattcaagcgctggctggccgatgtcgaagagggaaaatggctagacggcaaa
aaagagcggccaaccgggcaaaccagcaataaaacctttgtcgcgacagagccagcccca
gcggctgaagtcacggcggtgttgtcgcaagagaactaccacactattttggatgaaaaa
tccttagctgactggatcgagcggcttaaaaaagcggacgtgtttgcgtttgatactgaa
accgacggccttgataccctcagcaacaacttgattggtctctcgtttgcggtcgctccg
ggcgaagcggcctatctgccactcgcgcatgattatctggacgcccccgcacagcttgat
cgtgactgggttctcgcgacactaaaaccgctgctggaagatgacaaagcccttaaagtt
gggcaaaacctcaagtttgatcaaagcatgttggcgcgttatggcattgagctgcgcggt
attgcattcgataccatgctggagtcttacgttttaaacagcgtggcgggccgccatgat
atggatagcttggcggagcgttacctcaaccataaaaccatcacctttgaagagattgcc
ggtaaaggcaaaaatcagctgacttttaaccagattgcgttggaacaagcgggaccttat
gcctcagaggatgccgatgtcaccctacagctacatttggtgctatggccgaagttgcag
gagagtgaagggctgaagcgcgtatttcaggaaattgagatgccgctgctgccgatttta
tcccgcattgagcgcaccggcgtattgattgaccaaaatatattggccgcgcactcaaaa
gagctgaccattcgccttgatgagctggaaaagcaggcccatgaactggcggaagagcca
ttcaacctcgcgtcacctaaacagctacaggtgattttgtatgaaaaacaaaaactgccc
atcttgaaaaaaacgccggggggcgcagcgtcgactaacgaggaagtgctggccgaattg
gcactggattatcctctgccgaaagtcattctcgaatatcgcggtttggcgaagctcaaa
agcacctataccgacaagctaccgctgatgattaacccggtgtcgggccgggtccatacc
tcttatcatcaggctgtgacggccactgggcgtctctcctcccgtgatcctaacctgcaa
aatataccggtgcgaaatgaagaagggcgtcgcatacgtcaggcttttattgcgccgcaa
ggttaccgcatcatggcggccgactactcacagattgaattgcgtatcatggcgcatctg
tcgcaggatgaagggctactgacggcatttgctgcggggaaagatattcaccgcgcgacc
gcagcggaagtctttggtttgccactggaaaaagtcacgagcgaacagcgccgtagcgcc
aaagcgattaactttggcctgatttatggtatgagcgcctttggtctggcacggcaactg
aatatcccgcgtggtgaagcgcagcgctacatggatctctactttgagcgctatccgggc
gtgctggaatatatggagcgcacccgcaaacaagccgctgatcaaggctacgtcaccaca
ctggatggccgccgcctctatctgcctgatattcactcgcgcaatgccaatcgccgtaag
gctgccgaacgtgaagcaatcaacgccccaatgcaaggcactgccgctgatatcattaag
cgagccatgattgccgtggatgcttggttacagcaagaacctgagcctttggtgcgggtc
atcatgcaggtacacgatgaattggtgtttgaggtgcatgaaagtgtattagaaagcgct
gaacagaaaatccgtgagttgatggaacagagtatgcagttggcggtgccactgaaggtt
gatgtcggggttggcgacaactgggatcaggctcactag
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