Yersinia mollaretii: HRD69_15365
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Entry
HRD69_15365 CDS
T06716
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ymo
Yersinia mollaretii
Brite
KEGG Orthology (KO) [BR:
ymo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ymo03016
]
HRD69_15365
Enzymes [BR:
ymo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
HRD69_15365
Transfer RNA biogenesis [BR:
ymo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HRD69_15365
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
QKJ04251
LinkDB
All DBs
Position
complement(3437232..3439166)
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHTQTPRVEGVVKGTEKGFGFLEVDGQKSYFIPPPQMKKVMHGDRI
IATLHTDKDREIVEPETLVEPFLSRFVGRVQRKDDRLSIVPDHPLLRDAIHCRAATDLPH
DFQTGDWAVAEMRRHPLKGDRAFNADLTAFITHGEDHFVPWWVTLARHNLEREAPVMVES
ALHDTDLQREDLTALNFVTIDSASTEDMDDALYVEDKGDGSLLLTIAIADPTAYVDENSE
LDLIARKRAFTNYLPGFNIPMLPRDLSDNLCSLRPNERRPVLVCRVTIAADGALGDDIRF
SAAWVESKAKLVYDEVSDWLEGQSDWQPQNPEIAQQITLLKQVCEARSQWRTEHALVFKD
RPDYRFLLGEKGEVLDIIVEHRRIANRIVEECMIAANVCAALALRDNLGFGIYNVHTGFD
PALVEQAATVLQANGVEADPQALLTLPGFCELRRHLDALPTQFLDSRIRRFQTYAEISTV
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIITGQQAEKPQDEITVQLAERRRLNRM
AERDVGDWLYARYLQPMAGTETRFPAEIIDVTRGGLRVRLLDNGAVAFIPAPFIHAVRDE
MVCSQETGTVQVKGETVYSQSDKIEVCIAEVRMETRNVVARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataacccgctgctggcgcagctaaaacagcaacttcacactcagaccccg
cgcgttgaaggcgtagtaaaaggtactgagaaaggctttggctttcttgaggtagacgga
cagaaaagttattttattccgccgccgcagatgaaaaaagtgatgcatggcgatcggatt
attgccaccctgcacaccgataaagatcgtgaaattgtggagccagaaacactggttgag
ccatttttatcgcgctttgtgggtcgcgtacaacgaaaagatgatcgcctctctatcgtc
cctgaccacccactgctgcgtgatgcgattcactgccgtgcagccactgatctgccgcat
gacttccagaccggtgattgggccgtcgccgaaatgcgccgccacccattaaaaggcgat
cgcgcttttaatgctgatttaaccgccttcattacccacggcgaggaccatttcgtccct
tggtgggtcactttagcgcgtcataatctggagcgtgaagccccagtgatggtggaatcc
gcactgcatgatactgatctgcaacgtgaagatctcaccgcactcaattttgtcaccatc
gacagtgccagtactgaagatatggatgatgcgctgtatgtggaagacaaaggtgacggt
tccctgttgttgaccattgcgattgccgacccgacggcttatgtcgatgaaaacagtgag
ttggatttaatcgcccgtaaacgcgcgttcaccaactatctgccgggctttaacatcccc
atgctgccacgggatttgtccgacaatctctgctctttacgacctaatgagcgccgtccg
gtgctggtgtgccgtgtcaccatcgccgctgatggggctttgggtgacgacattcgcttc
tctgccgcgtgggtcgaatccaaagccaagctggtgtatgacgaagtctctgattggctg
gaaggccaaagtgactggcagccgcaaaacccagaaattgcgcagcaaatcaccctgctg
aaacaagtttgtgaggcccgcagccagtggcgtaccgaacatgcgctggtatttaaagat
cgcccagactaccgcttcctgctgggtgaaaaaggcgaagtgctggacatcattgttgag
catcgccgcattgcgaaccgcattgttgaggagtgcatgattgccgccaatgtctgcgcc
gcccttgcgctgcgtgataatcttggctttggcatttataacgtgcataccggatttgat
ccggcactggttgagcaagcagcgacggtactgcaagccaatggcgtcgaagctgaccca
caagcgctgctgactctgccgggcttctgtgagttgcgccgccatcttgatgccttgcca
acccagttcctcgacagccgtatccgccgcttccagacctatgctgaaatcagcacggtg
ccaggtccacactttggtttggggctggaggcttatgccacttggacatcgcctattcgt
aaatatggcgatatggtcaatcaccgcctgctaaaagctattattaccggccaacaagcg
gagaaaccgcaagatgagatcacggtgcaattggctgaacgtcgtcgcctgaatcgcatg
gctgaacgcgatgtcggtgactggttatatgcccgttatctccagccgatggctggcact
gagactcgcttccctgcggagatcattgatgtgacccgtggcggtttgcgcgtgcgcttg
ctggataatggcgcggtggcctttattcccgcaccctttattcatgccgttcgtgatgag
atggtgtgcagtcaggaaactggcaccgtgcaggttaaaggtgagacggtttacagccag
agtgacaaaattgaagtttgcattgctgaagttcgcatggaaacccgcaatgtggttgcc
cgtccggtggcttaa
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