Yersinia mollaretii: HRD69_20020
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Entry
HRD69_20020 CDS
T06716
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ymo
Yersinia mollaretii
Pathway
ymo00260
Glycine, serine and threonine metabolism
ymo00460
Cyanoamino acid metabolism
ymo00630
Glyoxylate and dicarboxylate metabolism
ymo00670
One carbon pool by folate
ymo00680
Methane metabolism
ymo01100
Metabolic pathways
ymo01110
Biosynthesis of secondary metabolites
ymo01120
Microbial metabolism in diverse environments
ymo01200
Carbon metabolism
ymo01230
Biosynthesis of amino acids
ymo01240
Biosynthesis of cofactors
ymo04981
Folate transport and metabolism
Module
ymo_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ymo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HRD69_20020
09102 Energy metabolism
00680 Methane metabolism
HRD69_20020
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HRD69_20020
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HRD69_20020
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HRD69_20020
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HRD69_20020
Enzymes [BR:
ymo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HRD69_20020
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
SapB_1
Motif
Other DBs
NCBI-ProteinID:
QKJ05092
LinkDB
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Position
complement(4513647..4514900)
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AA seq
417 aa
AA seq
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MLKREMNIADYDADLWRAMEQEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSGSQANVAVYSALLQPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIVPYGIDESGQIDYDDLARQAEKHKPKMIIGGFSAYSGI
VDWAKMREIADSIDAWLFVDMAHVAGLVAAGVYPNPVPHAHIVTTTTHKTLAGPRGGLIL
AKGGDEDLYKKLNSSVFPGNQGGPLMHVIAGKAVALKEAMEPEFKIYQQQVAKNAKAMVS
VFLDRGYKVVSGGTENHLFLLDLVDKNITGKDADAALGRANITVNKNSVPNDPKSPFVTS
GVRIGSPAITRRGFKEAESRELAGWMCDVLDNINDEATIERVKQKVLDICARLPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattatgatgcagatctatggcgtgcaatggag
caagaagtggtgcgtcaggaagagcacatcgaactgattgcgtctgagaactacaccagc
ccgcgtgttatgcaggcgcagggttctcagttgacgaacaaatatgctgaaggctatccg
ggcaagcgttactacggtggctgtgagtatgttgacgtggttgagcaactggctatcgac
cgcgcgaaagagctgtttggcgctgattatgccaacgttcagccacactcaggctcacaa
gcgaacgtcgcggtttactccgcattgctgcaaccgggtgacacggttctggggatgaat
ctggcacacggcggccacctgactcacggctctccagtgaatttctccggcaaactgtac
aatatcgtgccttatggcatcgacgaatcgggtcagattgattatgacgatctggcacgt
caggctgaaaaacataaaccaaaaatgatcatcggcggcttctctgcctattccggtatc
gttgattgggcaaaaatgcgtgaaattgcagatagcattgatgcatggctgtttgtggat
atggctcacgtagccggtctggtggctgcgggtgtctaccctaaccccgttcctcatgca
catatcgtgactaccaccacgcacaaaacactggctggcccacgcggcggcttgattttg
gcgaaagggggagatgaagacctctacaaaaaactgaattcatctgttttccctggcaat
cagggtggtccattgatgcacgttatcgcgggtaaagcggtcgcgctgaaagaagccatg
gaacctgagttcaagatttaccagcagcaagtggctaaaaacgccaaagctatggtgtcg
gtgttcttggatcgcggctacaaagtggtttctggcggtactgaaaaccacctgttcttg
ctggatctggtggataaaaatatcaccggtaaagatgctgatgctgctttaggccgcgcc
aatatcactgtgaacaaaaacagcgtacctaatgatccgaaaagtccgtttgtgacttcc
ggtgtgcgtattggtagcccagcgattacccgccgtggcttcaaagaggcagagtctcgc
gaactggctggctggatgtgtgatgtgttggacaacatcaacgatgaagcaaccattgaa
cgtgtgaagcaaaaagtcttggatatctgcgcccgtttaccggtttacgcataa
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