Yersinia mollaretii: HRD69_20315
Help
Entry
HRD69_20315 CDS
T06716
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ymo
Yersinia mollaretii
Pathway
ymo03420
Nucleotide excision repair
ymo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ymo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HRD69_20315
03430 Mismatch repair
HRD69_20315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ymo03400
]
HRD69_20315
Enzymes [BR:
ymo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HRD69_20315
DNA repair and recombination proteins [BR:
ymo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HRD69_20315
MMR (mismatch excision repair)
Other MMR factors
HRD69_20315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
NTPase_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QKJ05145
LinkDB
All DBs
Position
complement(4576401..4578029)
Genome browser
AA seq
542 aa
AA seq
DB search
MATFTPSAEQNQAIQYESDMVITARPGSGKTSVLSCKVRNMVSELRPYQGIIAISFTNKA
SDELGRRCRADAFDVKSSFFGTIDDFCLREIIFPFARQLMSAAAEVKTVKIRELPDSVTR
MLPVTPLKDGSVTNTIKFLPFIQQALALGFVPLEAVGMLAHYVVGRSLACQKYLVARYRA
VYIDEYQDSGYFQHQLFQKLKELGLTAVAVGDNDQSIYAFAQKSPKHLLALTAQGSGFEH
FSITTNFRCHPSINDFALRLLNPNHPITPTDNMRVLIKTINGDQRAMGLWLETAIPHLVD
HYQIASAERVAILCRHQHSAKLIANHLRLSHRLVEDNPFEAAPTTEATLFSDLLKLRYDP
RMTAESLIDRAGKLNRTTQELRALRRAILSCRSCLDGDLIVRVLAAAASLLRQQPSPVAV
TELESVCGDTAKLRWFQRPSDNAVQIMTLHKAKGLEFDLVFHADLYDHVIPTRLYPPGTF
GQVIFENETQCLNLHYVGVTRAIKACVLMTSNYRINGQGNVKNGDPSQFIGRNGAIATPI
IW
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctaccttcacgccaagtgcagaacaaaaccaagctattcaatacgagagcgacatg
gttatcaccgcccgtcccggcagtgggaaaaccagcgttctgtcatgcaaggttcggaac
atggtgtctgagctacgtccctaccaaggcatcatcgccatttccttcacaaacaaagcg
agtgacgagctgggtcgccgctgcagagccgacgctttcgacgtgaagagttctttcttc
ggcactatcgacgatttttgtcttcgagagatcatctttccattcgcgcggcagttgatg
tctgcggccgctgaggtcaagactgtcaagatcagggaactgcccgactcggtgacacgt
atgctaccggtgacgccgcttaaggacggtagcgttaccaacacaattaagttcctgccg
ttcatacagcaggcactagccttaggtttcgtccccttagaagcagtaggtatgcttgcc
cactacgtggtcggacggtcacttgcctgccagaaatacctcgtggcacgttatcgagca
gtctatattgacgaatatcaggacagtggatactttcagcatcagttatttcaaaagttg
aaggaacttggtttgacagctgttgcagtcggcgacaatgaccaatctatttatgcattt
gctcaaaaatcccccaaacatctactagcacttacagcgcaaggcagcggctttgagcat
ttttctatcactactaatttccgctgtcatccgtccatcaatgattttgcacttcgtctg
ctcaacccaaaccatccaatcacgccgacggacaatatgcgggtgttaatcaagacgatc
aatggtgaccaacgtgctatgggtctctggttagaaaccgccatacctcatctagtggat
cactatcaaattgcctcggcggaaagagtggccattctctgtcggcatcagcattcggcg
aagttgattgctaatcatctgagactttctcaccgacttgtcgaggataatcctttcgag
gcagcaccaacgaccgaagcaacacttttttctgatttgctgaaactgcgttacgaccca
aggatgactgccgagtctctgattgatcgagctggtaaactaaatcgaactacacaggag
ctgcgcgcgcttcgtcgagcgattttaagttgccgatcttgcttagatggcgatctcatt
gtgagagtgttagctgcggccgcaagcttactaagacaacaaccttcaccagtcgctgtg
actgagcttgagagtgtttgcggtgataccgccaagcttcgctggttccaaagacccagc
gacaatgccgttcagattatgaccctgcacaaggccaaagggctggaatttgaccttgtt
ttccatgctgatctgtacgatcacgttattcctacacgcctctatcctccaggaacattt
ggtcaggttatctttgagaatgaaactcaatgtttaaatctgcattacgttggggtcacg
cgtgcgattaaagcttgcgtgttgatgacatcgaactatcgcatcaatgggcaaggaaat
gttaagaacggtgatccctcacagttcattggtaggaacggcgcgattgctacacccatc
atttggtaa
DBGET
integrated database retrieval system
