Yersinia pestis Antiqua (biovar Antiqua): YPA_0939
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Entry
YPA_0939 CDS
T00369
Name
(GenBank) putative penicillin-binding protein
KO
K18988
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:
3.4.16.4
3.4.21.-]
Organism
ypa
Yersinia pestis Antiqua (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:
ypa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ypa01002
]
YPA_0939
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ypa01011
]
YPA_0939
Enzymes [BR:
ypa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
YPA_0939
Peptidases and inhibitors [BR:
ypa01002
]
Serine peptidases
Family S12: D-Ala-D-Ala carboxypeptidase B family
YPA_0939
Peptidoglycan biosynthesis and degradation proteins [BR:
ypa01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
YPA_0939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-lactamase
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
ABG12907
UniProt:
A0A0E1NW93
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Position
complement(1087432..1088598)
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AA seq
388 aa
AA seq
DB search
MDKRLLKRLSAPLLAAALWTIPLHSHADTQPLTSQDTKLLTSQIVDQYAEHIFYNSGAVG
MALVVIDNNQVVNRSFGETQPGNNIRPRPDSLIRIASITKLMTSEIMVKLADDGIVKLTD
PLKKYAPKGVNVPSYSAKQPIRLLHLASHTSGLPREQPGGPQKRPVFTWPTKDNRWQWLK
LAKVTVPPGVKAAYSNLAYDLLADALSRAAGKPYAHLLRDKITAPLGMKNTTLTPTAEQC
KRLMIGVGSSRCGNTVAAAGSGGIYSTPEDMQHWMQQFLASDNSAPKRSAKREQALYFQR
GDLVSLKGMDVAGQADALGLGWVYMAPKADLPGIMQKTGGGGGFITYMAMVPEKNIGVFV
VVTRSQLTKFSNMSDGVNQLVAELVKNH
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggataaaagattgttgaaacgtctctctgccccgctgctggctgctgctttgtggact
attccgttgcacagccatgccgatactcagccgttgacctcgcaagatactaagctgttg
acctcgcaaattgttgaccaatacgccgaacatatcttctataacagtggagctgtagga
atggctctggtggttatcgataacaatcaggtcgtcaaccgtagctttggtgaaacgcaa
cccggcaacaatattcgcccacggccagactcactgatccgcattgcatcaataaccaag
ctaatgaccagcgaaatcatggtaaaactggctgatgatggcatcgttaagttaactgac
ccgttaaaaaaatatgcaccgaaaggggtcaacgttccctcttacagtgctaagcaacct
attaggctgttgcatctggccagccataccagcggcctcccccgtgagcaacccggcggc
ccgcaaaaaagaccggtgtttacctggccgaccaaagataatcgctggcaatggttgaaa
ctggccaaagtgaccgttccaccaggcgtgaaagccgcttactctaatttagcttacgac
ttactggctgacgcactgtcacgagctgcggggaaaccgtatgcccacttattacgtgat
aaaatcaccgcaccactggggatgaaaaataccaccctgaccccgacggcggagcaatgt
aaacgcctgatgataggtgttggcagcagtcgttgtgggaatacagttgcagcagcaggt
agtggcggcatttactcgacccccgaagatatgcagcactggatgcaacaattcttagct
tctgataacagcgcccccaagcgttccgccaaacgtgagcaagcgctttacttccagcgc
ggtgacttggtgtcattgaaaggtatggatgtcgccggtcaagctgatgctctgggctta
ggctgggtttatatggcacctaaagctgacttaccgggcattatgcaaaaaaccggcggt
ggcggtggatttattacttatatggcgatggtcccagaaaaaaacattggcgtttttgtg
gtggtcacacgaagccaactgactaaattcagcaatatgagtgatggtgtgaatcaattg
gttgctgagttggtgaaaaatcattga
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