Alloyangia pacifica: CEW88_00370
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Entry
CEW88_00370 CDS
T05431
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ypac
Alloyangia pacifica
Brite
KEGG Orthology (KO) [BR:
ypac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypac03400
]
CEW88_00370 (addA)
Enzymes [BR:
ypac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CEW88_00370 (addA)
DNA repair and recombination proteins [BR:
ypac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CEW88_00370 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AWI82256
UniProt:
A0A2U8HAV7
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All DBs
Position
1:92000..95374
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AA seq
1124 aa
AA seq
DB search
MSRNEASEKQVEAARPDTSTWLAANAGSGKTRVLTDRVARLLLDEVLPEHILCLTYTKAA
ATEMQNRLFKRLGAWSMLDDDQLIAELRQLGLDGALPPARLRQARTLFARAIETPGGLRI
QTIHSFCASLLRRFPLEAGVSPQFTEMEDRSAEMLRAEVLERMAEGRDAWLVEAMAPFLG
EQPEALLAELCGRKAAFLPPRSPEDIRALYGLPGDMDEDAVLAEVFLGSESDLIARVIPV
LQAGKSTDQGAAKKLARFTGPDMAGMLALEDALLTQKGTISSRVPTKDSKQALGPDAPRL
EQLAQRVESARESRLAVEAVKREITLHRFAQVFLPAYEAEKMRRGWLDFDDLVVRARDLL
ADDRVADWVLYRLDGGIDHILVDEAQDTSPVQWQVIERLAREFTSGEGARGDVRRTIFVV
GDKKQSIYSFQGADPREFDRMCDDFADRLQATDAPLSRMMLEYSFRSAGPVLQLVDATFE
GREESGFSPEQRHKAFKSEMPGRVDLWPHIEPAKEEEEDAEWYEPVDRIGAQHHTVRLAN
RIAGFIAETIGKPLPVEIGFSGQYKARPAHAGDFLILVRRRGTLFTEIIRAIKARGLPIA
GADRLKVMSELAVKDIGALLAFLATPEDDLSLATALRSPLFGLTEKALFDLAHPRKPGSY
LWVALRERREEFPAVLQVMDDLLNRTDFLRPYDLIERILTRHRGRQKLLGRLGEEAEDGI
NALLQQALAYEQSTVPSLTGFLEWMQSDDLEIKRAPDSAGARIRVMTVHGSKGLEAPIVI
LPDCAQPTKTIRERLLPAGDGETAGMVWQSSAAAQPQVQSEALERAKAAAERERDRLLYV
ALTRAEKWLVVAAAGNLGKDGSAWFDQVQKGMERAGAETVGYDFGRWGSGEGLRLGQADW
SHLPFEQVSVQTPVLPELEPHLLTPAPLPAPLPESRSPSDLGGAKALSGIDGLDEDEAKL
RGTVLHLLLEHLAPLPAAARAKAVPHVLTLAEDLPAETETIVIEALSVLGAPALAPVFAG
NALAEVPISAEIEPVGRIHGVIDRLLVTPDKIIALDFKSNRTVPRSAAEVPEGLLRQMGA
YAAALTQVFPGRIIETGLVWTATQELMVLPHDLVSAALSRTSPT
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcaacgaggccagcgaaaagcaggtcgaagccgcccgcccggatacctccaca
tggcttgccgccaacgccggttcgggcaagacccgcgtgctgaccgaccgggtggcgcgg
ctgctgctcgacgaggtgctgcccgagcatatcctgtgcctgacctacaccaaggccgcc
gccaccgagatgcagaacaggctgttcaagcgactcggcgcctggtcgatgctcgacgac
gaccagctcatcgccgaactgcgccagctcggccttgatggcgcgctgccgcccgcgcgg
ctgcggcaggcgcgcacgctctttgcccgcgccatcgagacccccggcggcctgcgcatc
cagaccatccactcgttctgtgcgagcctgttgcggcgctttccgctcgaagccggggtg
tcgccacagttcaccgagatggaggaccgctccgccgaaatgctgcgcgccgaggtgctc
gaacgcatggccgaggggcgcgacgcctggctggtcgaggccatggcccccttcctcggc
gaacagcccgaggcgcttttggccgaactttgcgggcgcaaggcggccttcctgccaccg
cgcagccccgaggacatccgcgcgctctatgggttgcccggcgacatggacgaggacgcg
gttctggccgaggtcttcctcggcagcgagagcgatctcatagcccgggtgatcccggtg
ctgcaggctggcaagagcaccgatcagggcgccgcgaagaagctcgcgcgcttcaccggg
ccggacatggccgggatgctcgcgctcgaggacgcgctgctcacccagaagggcacgatc
agcagccgcgtgccgaccaaggacagcaagcaggcgctcggccccgatgcgccccgcctc
gagcaactggcgcagcgggtggaatcggcccgcgagagccgcctcgccgtcgaggcggtg
aagcgcgagatcaccctgcaccgcttcgcgcaggtcttcctgcccgcctacgaggccgag
aagatgcgccgcggctggctcgatttcgacgatctggtggtgcgcgcccgcgaccttctg
gccgacgaccgtgtcgccgactgggtgctctaccggctcgatggcggcatcgatcatatc
cttgtcgacgaggcgcaggacaccagcccggtgcaatggcaggtgatcgagcggctggcg
cgcgagttcacctcgggcgaaggcgcccgcggcgatgtgcggcggacgatcttcgtcgtc
ggcgacaagaagcagtcgatctattccttccagggcgccgacccgcgcgagttcgaccgc
atgtgcgacgacttcgccgaccgcctgcaggccaccgacgcgccgctcagccgcatgatg
ctggaatattccttccgctccgccgggccggtgctgcagctggtggatgccaccttcgag
ggccgcgaggaatcgggcttttccccggaacagagacacaaggcgttcaaatccgagatg
cccgggagggtcgatctctggccgcacatcgagcctgccaaggaagaagaggaagacgcc
gagtggtacgagcccgtcgaccgcatcggcgcgcagcaccataccgtgcggctggccaac
cgcatcgccggcttcattgccgagaccatcgggaaaccgctgcccgtcgagatcggcttt
agcggccagtacaaggcccgccccgcccatgccggcgacttcctgatcctcgtgcggcgg
cgcggcacgctcttcaccgagatcatccgtgccatcaaggcccgcggcctgcccatcgcc
ggggcggaccggctgaaggtcatgtcggagctggcggtgaaggacatcggcgcgctgctg
gccttccttgcgacgcccgaggatgacctgtcactcgccaccgcgctgcgctcgccgctc
ttcgggctgacggaaaaggcgctcttcgatctggcacatccccgcaagcccggcagctat
ctctgggttgccctgcgcgagcggcgcgaggagtttcccgccgtgctgcaggtgatggac
gacctgctgaaccgaaccgacttcctgcgcccctacgacctgatcgagcgcattctgacc
cgtcaccgcggccgccagaagctgctcgggcgcttgggcgaagaggccgaggacggcatc
aacgcgctgctacagcaggcgcttgcctacgagcagagcaccgtgccctcgctcaccggc
tttctcgagtggatgcagtccgacgatctggaaatcaagcgcgccccagacagcgccggg
gcccgcatccgggtgatgacggtgcatggctccaagggtctggaagcgccgatcgtcatc
ctgcccgactgtgcccagcccaccaagaccatccgcgaacgcctgctgcccgcgggcgac
ggcgagaccgctggcatggtctggcagtcgagcgccgcagcgcagccacaggttcagtcc
gaggcactggagcgcgccaaggccgccgccgagcgcgagcgcgaccggctgctctacgtc
gccctcacccgcgccgagaaatggctggtggtcgccgccgcgggcaatctcggcaaggac
ggcagcgcctggttcgaccaggtgcagaaaggcatggaacgcgccggggccgagacggtc
ggctacgatttcggaaggtggggctcgggcgagggcctgcggcttggtcaggccgactgg
tctcacctgccctttgagcaggtcagcgtgcagacgccggtgctgcccgaactggagccg
cacctgctgacccccgcgcccctgcctgccccgctgcccgagagccgctcgccctcggat
ctcggcggcgccaaggcgctttcggggatcgacgggctcgacgaggacgaagccaaactg
cgcggcacggtgctgcacctgctgctggagcatctcgcgccgctccccgccgccgcgcgc
gccaaggcggtcccgcatgtgctgaccctcgccgaggatctgcccgcggaaacagagacc
atcgtcatcgaggcgctttcggtgctcggcgccccggctctggcgccggtctttgccggg
aacgccctcgccgaagtgccgatttccgccgagatagagcctgtcgggcgcatccacggg
gtcatcgaccggctgctggtcacgcccgacaagatcattgcactcgacttcaaatccaac
cgaaccgtgccccgctccgccgccgaggtgcccgagggtctgctgcgccagatgggggcc
tatgccgccgccctgacgcaggttttcccggggcgcatcatcgaaaccggcctcgtctgg
accgccacgcaggaactgatggtcctgccacacgatctggtgtctgcggctctttcgaga
actagcccaacttga
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