Alloyangia pacifica: CEW88_00845
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Entry
CEW88_00845 CDS
T05431
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ypac
Alloyangia pacifica
Pathway
ypac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ypac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CEW88_00845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypac03400
]
CEW88_00845
Enzymes [BR:
ypac01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CEW88_00845
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CEW88_00845
DNA repair and recombination proteins [BR:
ypac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CEW88_00845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AWI82340
UniProt:
A0A2U8H9S4
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All DBs
Position
1:186093..186944
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AA seq
283 aa
AA seq
DB search
MPELPEVETVRAGLAPVMENEVIAEAKVNRPDLRWPFPERMAERLTGARVLRLRRRSKYI
LADLDTGETLLIHLGMSGRMLVSGDPLGRFVHDHPAPEKHDHVVFEMASGARVTFNDPRR
FGAMDLMQTATAGAHPLLAAIGPEPLGNEFSESHLVAALKGRSMPIKTALLDQKIVAGLG
NIYVCEALFRAGIRPSRRVNQISEKRISALVPIIRHVLTDAISAGGSSLKDFRQADGELG
YFQHSFDVYGREGQPCRGDGCANIIHRIVQSGRSSFYCPSCQR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacttcccgaggtggaaaccgttcgtgccgggcttgccccggtgatggaaaac
gaggtgatcgccgaggccaaggtaaaccggcccgatctgcgctggcccttccccgagcgt
atggccgagcgtctgaccggcgcgcgggtgctgcggctgcgacggcggtcgaaatatatc
cttgccgatctcgacaccggcgagacccttctgatccatctcggcatgtcgggccgaatg
ctggtctcgggcgatccgctggggcgcttcgtgcatgaccatcccgcgccggaaaagcac
gaccacgtggtctttgaaatggccagcggcgcgcgggtgacattcaacgacccgcggcgt
ttcggggcgatggacctgatgcagacggcgaccgccggggcgcatcctctgctcgcggcg
atcgggccggaaccgctgggcaatgaattcagcgaatcccatctggtggctgccttgaag
gggcgcagcatgccgatcaagacggcgttgctggaccagaagattgttgccggattgggg
aatatctatgtttgcgaagccttgttccgcgcgggcatccgtccttcacgccgcgtcaac
cagatctcggaaaagcgcatctcggcgctcgttccgatcatccggcacgtgctgacggac
gccatttccgcgggcggctcctcgctcaaagatttccggcaagccgatggagaacttgga
tattttcagcacagcttcgacgtctacggacgcgaagggcagccctgccgcggggacggt
tgcgccaacatcattcacagaatcgtgcaatccggacgctcttccttctactgtccgagc
tgccaaagataa
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