Alloyangia pacifica: CEW88_00870
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Entry
CEW88_00870 CDS
T05431
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
ypac
Alloyangia pacifica
Pathway
ypac03030
DNA replication
ypac03430
Mismatch repair
ypac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ypac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CEW88_00870
03430 Mismatch repair
CEW88_00870
03440 Homologous recombination
CEW88_00870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ypac03032
]
CEW88_00870
03400 DNA repair and recombination proteins [BR:
ypac03400
]
CEW88_00870
Enzymes [BR:
ypac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CEW88_00870
DNA replication proteins [BR:
ypac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CEW88_00870
DNA repair and recombination proteins [BR:
ypac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CEW88_00870
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AWI82345
LinkDB
All DBs
Position
1:190655..191773
Genome browser
AA seq
372 aa
AA seq
DB search
MKVSIERATLLKAVSQAQSVVERRNTIPILANVLIEAEGNSASFRATDLDIEVLDRAPAV
VEQAGATTVSAVTLHEIVRKLPDGALVQLTADTSAGRLTVAAGRSNFSLATLPKEDFPVM
ASSEYSSNFTAKAEVLRRLFDKSKFAISTEETRYYLNGVYMHVAESEEGRVLRCVATDGH
RLARIDAPLPAGAEEMPGVIVPRKTVGELRKLLEEDDMDIAVSVSETKVRFATPDITLTS
KVIDGTFPDYSRVIPMNNTRRLEVDAGEFAKAVDRVATVSSERSRAVKLQLDEDRLILSV
NAPDSGAAEEELAVAYGDEPLEIGFNAKYLLEIASQVDRENAVFMFNSSGDPTLMREGTD
TSAVYVVMPMRV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcagcattgaacgggcgacgctgctcaaggcagtcagccaggcacaatctgtg
gtcgagcgccggaacaccattccgatcctcgccaatgtgctgatcgaggccgagggcaac
tcggccagcttccgcgccaccgatctcgacatcgaagtgctcgaccgcgcccccgcggtg
gtcgaacaggccggggccaccaccgtctcggcggtgaccctgcacgagatcgtccgcaag
ctgcccgacggcgcgctggtccagctgaccgccgacacttccgccggccggctgaccgtg
gccgcaggccgctcgaacttcagtctcgcgacgctgcccaaggaagacttcccggtcatg
gcgtcgtcggaatactcgtcgaacttcaccgccaaggccgaagtcctgcgcaggctcttc
gacaagtcgaagttcgcgatctcgaccgaggaaacgcgttactacctcaacggcgtgtac
atgcatgtcgccgagagcgaggagggccgggtgctgcgctgcgttgccaccgacggtcac
cgcctcgcccgcatcgacgcgccgctgcctgctggtgcagaagagatgcccggtgtgatc
gtgccgcgcaagaccgtgggagagctgcgcaaactgctcgaagaggacgacatggacatc
gccgtgtcggtctcggaaaccaaggtgcgcttcgccacgcccgatatcacgctgacctcc
aaggtcattgacggcaccttcccggactactcgcgcgtcatcccgatgaacaacacccgc
cggctcgaagtcgacgcgggcgagttcgccaaggccgtcgatcgagtggcaactgtctcg
tcggagcgctcgcgcgccgtgaagctgcagctcgacgaggaccggttgatcctctcggtc
aatgctcccgacagcggtgccgccgaggaagagctggccgtggcctatggggatgagccg
ctggagatcggcttcaacgcgaaatacctgctggagatcgccagccaggtggaccgcgag
aacgccgtcttcatgttcaactcctcgggcgatccgaccctgatgcgcgaaggcaccgac
acgtctgccgtctacgtagtcatgccaatgcgggtctga
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