Alloyangia pacifica: CEW88_01025
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Entry
CEW88_01025 CDS
T05431
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ypac
Alloyangia pacifica
Pathway
ypac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ypac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEW88_01025 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ypac03019
]
CEW88_01025 (recQ)
03400 DNA repair and recombination proteins [BR:
ypac03400
]
CEW88_01025 (recQ)
Enzymes [BR:
ypac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CEW88_01025 (recQ)
Messenger RNA biogenesis [BR:
ypac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CEW88_01025 (recQ)
DNA repair and recombination proteins [BR:
ypac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CEW88_01025 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
AWI82366
UniProt:
A0A2U8HB82
LinkDB
All DBs
Position
1:complement(225523..227580)
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AA seq
685 aa
AA seq
DB search
MPRDTAPAEALLKDIFGYDAFRPGQGEIVGAVAAGHNVLAIMPTGGGKSLCYQLPALLRG
GLTVVISPLIALMRDQVRGLREAGVAAGALTSGNTQDETDAVWQGLEDGSLRLLYLAPER
LASTGTQRMLAQAGVGLIAVDEAHCVSQWGHDFRPDYLRIGELRRALNVPIAAFTATADQ
ETQAEIVTRLFDGQQPETFLRGFDRPNIHLAFAPKDSPRAQILRFAAARRGRSGIVYCGT
RAKTEALSKALGDEGHPTCFYHGGMEAEARRAVEERFATEDGLIVCATVAFGMGVDKPDI
RWVAHADLPKSIEAYYQEIGRAGRDGAPAETLTLYGADDIRLRRAQIDEGMAPPERRTAD
HGRLNALLGLAEALGCRRQALLRYFGEESAPCGNCDLCDSPPEVFDGTEAVRKALSAALR
TGENFGAGHLIDILLGNETDKVRQRGHDGLPTFGVGKDLKKGQWQAVFRQMMGRDLVRPD
PERHGALVMTEAARPILRGEQSIELRRDVIDKAAERRPQVKTLVSEEDAPLMSALKAKRR
ALAEAASLPAYMIFPDRTLIEMAERRPETLDQMGAISGVGAKKLERYGAEFLSVITGGVP
EETHPLRMRAAARGAGDLYDRLMSAQAELVRGIDGTEKPLSCSASLLAKIAGLRDPAPED
LERILGDRRFERFGAAFMDLLAEAG
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcgacaccgcgcccgccgaggcgctgctgaaggatattttcggctatgacgcc
ttccgcccgggacagggcgagatcgtcggggccgtggcggcggggcacaacgttctggcc
atcatgcccactgggggcggcaaatcgctctgctaccagctgccggcgctgctgcgcggc
gggctgacggtggtgatctcgccgctgatcgcgctgatgcgcgaccaggtgcgcgggctg
cgcgaggccggggtggccgccggggcactgacctccggcaacacccaggacgaaaccgat
gccgtctggcaagggctcgaggacggctcgctgcggctgctgtacctcgcgccggaacgg
ctcgcctccaccggcacgcagcgaatgctggcgcaggcgggcgtcgggctcattgcggtc
gatgaggcgcattgcgtcagccaatgggggcatgacttccgccccgactatctgcgtatc
ggcgagctgcgccgggcgctgaacgtgcccatcgccgccttcaccgccaccgccgaccag
gagacccaggccgagatcgtcacgcgcctgttcgatggccagcagcccgaaacctttctg
cgcggcttcgaccggcccaacatccacctcgcctttgcccccaaggacagcccgcgcgcg
cagatcctgcgcttcgccgccgcccgccgcggccgctcggggatcgtctattgcggcacc
cgcgccaagaccgaagcgctgtcgaaagcgcttggtgacgaggggcacccgacctgcttc
taccacggcggcatggaggccgaggcccgccgcgccgtcgaggagcgcttcgccaccgag
gacgggctgatcgtctgcgccacggtcgccttcggcatgggggtcgacaagcctgacatc
cgctgggttgcccacgccgacctgccgaaaagcatcgaggcctattaccaggagatcggc
cgcgccgggcgcgacggcgcgcctgccgagacgctcaccctttacggcgccgacgacatc
cgccttcgccgcgcccagatcgacgaaggcatggcgccgcccgagcgccggacggccgac
cacggaaggctcaacgcgctgctggggctggccgaggcgctgggatgccgccgccaggcc
ctgctgcgctacttcggagaagagtccgcgccctgcggcaactgcgatctctgcgacagc
ccacccgaggtcttcgacggaaccgaggcggtgcgcaaggcgctttccgccgcgctgcgc
accggcgagaacttcggcgcgggccacctgatcgacattcttctgggcaatgagaccgac
aaggtgcgccagcgcggccacgatggcttgccgaccttcggagtgggcaaggacctcaag
aaggggcaatggcaggccgtctttcggcagatgatggggcgcgatctggtgcgccccgat
cccgagcgccacggcgcgctggtgatgaccgaggccgcccgcccgatcctgcgcggcgag
cagagcatcgagctgcgccgcgacgtgatcgacaaggccgccgagcgccgcccgcaggtc
aagacgctggtgtcggaggaagacgcgccgctgatgtcggcgctgaaagccaagcgccgc
gcgctggccgaggcggcctcgctgccggcctacatgatcttccccgaccgcacgctgatc
gagatggccgagcggcgccccgaaacgctcgaccagatgggcgcgatcagcggtgtcggc
gccaagaagctggagcgctacggcgccgagttcctctcggtgatcaccggcggcgtgcca
gaggaaacccacccgctgcggatgcgcgccgcggcgcgcggcgccggcgatctctacgac
cgtctgatgagcgcccaggccgagctggtgcgcgggatcgacggcaccgaaaaacctctc
tcctgctccgcctcgctgctcgccaagatcgccgggctgcgcgatcccgcacccgaggat
ctggagcggatcctcggcgaccggcggttcgagcgttttggcgcggcctttatggacctt
ctcgccgaagctggttag
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