Alloyangia pacifica: CEW88_01950
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Entry
CEW88_01950 CDS
T05431
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ypac
Alloyangia pacifica
Pathway
ypac02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ypac00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CEW88_01950
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ypac02000
]
CEW88_01950
Transporters [BR:
ypac02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CEW88_01950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AWI82533
UniProt:
A0A2U8H9X2
LinkDB
All DBs
Position
1:406039..407523
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AA seq
494 aa
AA seq
DB search
MTRPIARFSLSLAALLLGSAAALAQQDDLIIALQLEPPHLDPTSAAAGAIDSVLYSNVFE
GLTKFAEDGSIHPGLAESWDISEDGTSYTFHLHEGVTFHDGTTMDAEDVKFSLDRARAED
SQNAQKALFAGIDEVTVLDPLTVQITLKAPDGGFLFNMAWGDAVVVAPESIEGIKSNPVG
TGPFTFTSWTQGDSISLTRNESYWGEAPALSRATFRFISDPTAAFAAMMAQDIDAYAGFP
APENLPQFEADPRFQVLVGSTEGETILAMNNGLEPFDDPLVREAVAHAIDRQAIIDGAMF
GLGTPIGTHFAPHNPDYVDLTDLSNYDPEASKTLLADAGYPDGFTTTLKLPPPSYARRGG
EIIAAQLRAVGIQTEITNLEWAQWLEEVFRGKDFGLTIVSHTEPMDINIYARPDYYFQYD
NPEFRDLMAKLTATTDPAARSEMLKQAQQIIAEDHVNAFLFQLAFPTVADAKLHGLWKNQ
PTQATDLTGVYWEK
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaccgatcgcccgtttcagcctctccctcgccgcgctgctgctcggctccgct
gccgcccttgcccagcaggacgatctgatcatcgcgctgcagctcgagccgccgcatctc
gacccgacctccgccgccgccggggcgatcgattccgtgctctacagcaacgtcttcgaa
gggctgacgaaattcgccgaggacggctccatccacccgggcctcgcggagagctgggat
atctccgaggacggcaccagctacaccttccacctgcatgagggcgtcaccttccacgac
ggaaccacgatggacgccgaggatgtgaagttcagcctcgaccgcgcccgcgccgaggac
agccagaacgcccagaaggcactctttgccgggatcgacgaggttaccgtgctggacccg
ctgaccgtgcagatcacgctcaaggcacccgacggcggcttcctgttcaacatggcctgg
ggagacgcggtggtcgtcgcgcccgagagcatcgaggggatcaaatcaaacccggtcggc
accggccccttcaccttcaccagttggacgcagggcgacagcatcagtcttacccggaac
gagagctactggggcgaggcgccggcgctgagccgcgccaccttccgtttcatctcggac
ccaaccgccgcctttgccgcgatgatggcgcaggacatcgacgcctatgccggcttcccg
gcgccggagaacctgccgcagttcgaggccgatccgcgcttccaagtccttgtcggctcg
accgagggcgagacgatcctggcgatgaacaacgggctcgagcccttcgacgatccgctg
gtgcgcgaggcggtggcccacgccatcgaccggcaggcgatcatcgacggggcaatgttc
gggctcggcacgccgatcggcacgcatttcgcgccgcataacccagactacgtcgacctg
accgacctgtcgaattacgatcccgaggcatccaagaccctgctcgccgacgcgggctat
cccgatggcttcaccaccacgctgaaactgccgccgccctcctacgcccgccgcggcggc
gagatcatcgcggcgcagctccgcgcggttggcatccagaccgagatcaccaacctcgaa
tgggcgcaatggctcgaggaggtgttccgcggcaaggacttcggcctgaccatcgtcagc
cataccgagcccatggacatcaatatttacgcgcggcccgactattacttccagtatgac
aacccggagttccgggacctcatggcgaagctgaccgcgaccaccgatccggcggcccgc
tcggaaatgttgaagcaggcgcagcagatcatcgccgaggatcacgtcaacgccttcctc
ttccagctcgccttcccgacagtggcggatgccaagctgcacggattgtggaagaaccag
ccgacgcaggccaccgatctcaccggggtttattgggaaaagtga
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