Alloyangia pacifica: CEW88_02465
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Entry
CEW88_02465 CDS
T05431
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ypac
Alloyangia pacifica
Brite
KEGG Orthology (KO) [BR:
ypac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ypac03016
]
CEW88_02465
Enzymes [BR:
ypac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CEW88_02465
Transfer RNA biogenesis [BR:
ypac03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CEW88_02465
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AWI82624
UniProt:
A0A2U8HA74
LinkDB
All DBs
Position
1:504468..505082
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AA seq
204 aa
AA seq
DB search
MANHLYQGDLPDGLDLGPAVAIDCETMGLNPQRDRLCVVQLSGGDGEAHLVQIARGQTEA
PNLCRLLEDPQVLKLFHFGRFDIAAMYHAFGALAAPVYCTKIASRLVRTYTDRHGLKNLT
HELLGVDISKQQQSSDWGAAELKPAQLDYAASDVLHLHRLRAVLDAMLEREGRREIAQAC
FEFLPTRAKLDLAGWPDTDIFAHV
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccatctttatcagggggatctgccggacgggcttgatcttggtccggccgtg
gccatcgactgcgagaccatggggctcaacccgcaacgggaccggctctgcgtggtacag
ctctctggcggcgacggcgaggcccatctcgtgcagatcgcccgtggacagaccgaggcg
ccgaacctctgccgcctgctcgaggatccacaggtgctgaagctcttccacttcggccgc
ttcgacatcgccgccatgtaccatgccttcggcgctctggccgcaccggtctattgcacc
aagatcgccagccggctggtgcgcacctatacagaccgccacgggctgaagaacctcacg
catgaattgctcggggtcgacatctcgaagcagcagcagtcgagcgactggggtgccgcc
gagctcaagcccgcgcaactcgactatgccgcctcggacgtgctgcacctgcaccgcctg
cgcgcggttctggacgcgatgctggagcgcgaggggcgccgcgagatcgcccaggcctgt
ttcgagttcctgccgacccgtgcgaagctcgacctcgccggctggccggacactgacatc
tttgcccatgtctga
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