Alloyangia pacifica: CEW88_03195
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Entry
CEW88_03195 CDS
T05431
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ypac
Alloyangia pacifica
Pathway
ypac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ypac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CEW88_03195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypac03400
]
CEW88_03195
Enzymes [BR:
ypac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CEW88_03195
DNA repair and recombination proteins [BR:
ypac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CEW88_03195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
Zn_ribbon_PriA
ResIII
Helicase_C
MarR_2
AAA_16
HTH_20
Imm49
AAA_22
AAA_5
Motif
Other DBs
NCBI-ProteinID:
AWI82760
UniProt:
A0A2U8HAZ6
LinkDB
All DBs
Position
1:659623..661812
Genome browser
AA seq
729 aa
AA seq
DB search
MDDFYDEGTLISVLTTQPLDRLLDYKAPVGGCAQGSYVEVPLGPRKVLGVVWGPGQGGFD
PAKVRAAFRVLDAPPMRAELREFLERAADYTLTPRTAMLRLATRAPGLGDGPAMRKIYRR
GEAEPDRMTDARRRVLEVLDEMGGLSLTLKELADAAGVTSSVVKGLAKQGAVREEEAPRD
TAFARLDPDYGGKALTEDQAAAAEVLRDGVRSGSYGTVLLKGVTGSGKTEVYLEAVAECL
RRGRQALVLLPEIALTSEFLTRVEARFGARPAEWHSGVTVTERRRVWRQVAEGGAQLVVG
ARSALFLPFRDLGLTVVDEEHDTSYKQEEGVLYNARDMAVLRASICAGRVVLASATPSLE
SWANADAGKYQRLDLVSRFGPAVMPQMRALDMRGEDLPGSRWISPSLQAAVKRRIAQGEQ
SLLFLNRRGYAPVTICRACGHQIACPHCDARMVEHRFQQRLICHQCGESTPKPEKCPSCE
VEGKLAAVGPGVERLAEEAAEVFPDARLAVLSSDLFGSARQLKAEIEKIAMGGADIVIGT
QLVAKGHNFPNLTLVGVIDADLGLQGSDLRAAERTFQLMRQVAGRAGRAEKPGTALLQTF
QPEHPVIRAILSGDEEGFWKAEADERRAAGMPPYGRLAGVILSSTEVQEVFDLGAAMARQ
DGPLRRIGAQVYGPAPAPIARVRGRHRVRLLVKAPKGVALQSALAEWAGQFRLKGELRMA
IDIDPQSFF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggatgacttctacgacgaaggcacgctgatctcggtgctgaccacgcagccccttgac
cggctgctggactacaaggcgccggtggggggctgcgcgcaggggtcctacgtcgaggtg
ccgctggggccgcgcaaggtgctgggcgtggtctgggggccggggcagggagggttcgac
ccggccaaggtccgcgccgccttccgggtgctcgatgcgccccccatgcgtgccgagctg
cgcgagtttctcgaacgtgccgccgattacacgctgaccccgcgcaccgccatgctgcgc
cttgccacccgcgcgccggggctcggcgacgggccggcgatgcgcaagatctaccgccgc
ggcgaggccgagccggaccggatgaccgatgcccggcgccgggtgctggaggtgctcgac
gagatgggcggcctgtcgctgacactcaaagagctggccgatgccgccggggtgacctct
tcggtggtcaagggtctcgccaagcagggggcggtgcgcgaggaggaggcgccgcgcgat
accgcctttgcccggctcgatcccgactacggcggcaaggcgctgaccgaggatcaggcc
gccgccgccgaggtgctgcgcgacggtgtgcgttcgggcagctatggtacggtgctgctg
aagggggtgaccggctcgggcaagaccgaggtctaccttgaagccgtggccgaatgcctg
cgcaggggccgacaggcgctggtgctgctgcccgagatcgcgctgacctcggagttcctc
acccgggtcgaggcccgcttcggcgcgcgccctgccgaatggcactcgggcgtcacggtg
accgagcgccggcgggtctggcggcaggtggccgagggcggcgcgcagctggtggtgggc
gcgcgttcggcgctcttcctgccgttccgtgacctgggcctgacggtcgtcgatgaggaa
cacgacacctcctacaagcaggaggagggcgtgctttacaacgcccgcgacatggcggtg
ctgcgcgcctcgatctgcgcggggcgggtggtgctggcctctgcgactccctcgctcgag
agctgggccaatgccgacgcgggcaagtaccagcggctcgatctggtctcgcgcttcggt
ccggcggtgatgccgcagatgcgggcgctcgacatgcgcggcgaggatctgccgggcagc
cgctggatctcgccctccttgcaggcggcggtgaagcggcggatcgcgcagggtgaacag
tcgctgctgtttctcaaccggcgcggctatgccccggtcaccatctgccgcgcctgcggc
caccagatcgcctgcccgcattgcgacgcgcgcatggtcgagcaccgcttccagcagcgg
ctgatctgccaccagtgcggcgagagcacgccgaagcccgaaaaatgcccctcctgcgag
gtcgagggcaagctggcggcggtggggccgggggtcgagcggctggccgaggaggcagcc
gaggtctttcccgacgcccggctggcggtgctgtcgtcggacctcttcggctcggcacgg
cagctcaaggccgagatcgagaagattgccatgggcggggccgacatcgtcatcggcacg
cagcttgtcgccaaggggcacaactttcccaacctgacgctggtgggggtgatcgacgcc
gacctcgggctgcagggctcggacctgcgggcggcggagcggaccttccagctgatgcgg
caggtggccgggcgtgccggtcgggccgagaagccgggcacggcgctcctgcagaccttc
cagcccgagcacccggtgatccgggcgatcctctcgggcgacgaggaggggttctggaag
gccgaggcggacgagcgccgcgcggccgggatgccgccctatggccgtctggcgggggtg
atcctgtcctcgactgaggtgcaggaggtctttgacctcggcgcggcgatggcacggcag
gacgggccgctgcggcgcatcggagcgcaggtctacgggccggcgccggcgcccatcgcc
cgcgtgcgcgggcggcaccgggtgcggttgctggtcaaggcgccgaagggcgtcgcgctg
cagtcggcgctcgccgaatgggccgggcagttccgtctgaagggcgagttgcgcatggcg
atcgacatcgacccgcagagctttttctga
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