Alloyangia pacifica: CEW88_04240
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Entry
CEW88_04240 CDS
T05431
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ypac
Alloyangia pacifica
Brite
KEGG Orthology (KO) [BR:
ypac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ypac03016
]
CEW88_04240
Enzymes [BR:
ypac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CEW88_04240
Transfer RNA biogenesis [BR:
ypac03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CEW88_04240
Prokaryotic type
CEW88_04240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF6390
Motif
Other DBs
NCBI-ProteinID:
AWI84590
UniProt:
A0A2U8HG23
LinkDB
All DBs
Position
1:887021..887791
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AA seq
256 aa
AA seq
DB search
MPRYALLVEYDGGPFAGWQRQADQPSVQGAIEAALAKLESREHTIAAAGRTDAGVHARGQ
VAHCDMQKDWDPFRLGEALNFHLKPAPVAIRACAAVADDWHARFSATERRYLFRVLVRRA
PATLETGQVWRVMNKLSLEAMREGAAHLIGLHDFTTFRSTMCQAASPVKTLDECRIEQVE
TGAGTEFHFHLRARSFLHNQVRSIVGTLERVGAGSWAPSDVRDALGAADRAACGPVCPPD
GLYLMGVGYPDDPFAG
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcccagatacgcgcttttggtggaatatgacggcgggcccttcgcggggtggcagcgt
caggcggatcagccctcggtgcagggggcgatcgaggctgcgctggcgaagctcgagagc
cgcgagcacaccatcgccgccgccgggcgcaccgacgcgggcgtgcacgcccgcgggcag
gtggcgcattgcgacatgcaaaaggactgggatccgttccgccttggcgaggcgctgaac
ttccacctcaaaccagcgcccgtggcgatccgcgcctgcgccgccgtcgcggacgactgg
cacgcgcgcttctcggcaacggagcggcgttacctcttccgggtgcttgtgcgccgcgcg
cccgcgacgctggaaacggggcaggtctggcgggtgatgaacaagctgtcgctcgaggcg
atgcgcgagggcgcggcgcatctcatcggtctgcacgacttcaccaccttccgctcgacg
atgtgccaggccgcctcgccagtgaaaacgctggacgagtgccggatcgagcaggtcgag
accggcgcgggcaccgagttccatttccacctgcgcgcccgaagcttcctgcacaatcag
gtgcgctcgatcgtcggcacgctggagcgggtcggcgcgggcagctgggcaccttccgac
gtcagggacgcgctcggcgctgccgaccgcgccgcctgcgggccggtctgcccgccggat
gggctctacctgatgggggtcggttacccggacgacccgtttgcgggctga
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