Alloyangia pacifica: CEW88_11305
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Entry
CEW88_11305 CDS
T05431
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ypac
Alloyangia pacifica
Brite
KEGG Orthology (KO) [BR:
ypac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ypac03032
]
CEW88_11305
03400 DNA repair and recombination proteins [BR:
ypac03400
]
CEW88_11305
Enzymes [BR:
ypac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CEW88_11305
DNA replication proteins [BR:
ypac03032
]
Prokaryotic type
DNA Topoisomerases
CEW88_11305
DNA repair and recombination proteins [BR:
ypac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CEW88_11305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
AWI84219
UniProt:
A0A2U8HEA0
LinkDB
All DBs
Position
1:2349906..2350883
Genome browser
AA seq
325 aa
AA seq
DB search
MTPRLDLIYYPDSQPGILRRRCGRGFSYIAPDGTRIDAAEERARIRALAVPPAYEQVWIC
PRANGHLQATGRDARDRKQYRYHPDWTAFRSERKYGHLAEFGAALPGLRRSILGQLRARD
PGDREFALAATLALLDRAGLRVGNADYAMENGSYGATTLRGTHLRLDGATLHLRFPGKGG
KRVHKQLKDRTLQRALTALGDLPGKELIAWLDEDGQPHGLRSDEINRWLAERTGNPALTA
KTFRTWNGSVAALEAARSAERVSIKAMAEAAAERLANTPTVARNSYIHPEVIALAETGLP
KALDRAPDRPGLRRSEAQLLALLER
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgcgcctcgatctcatctactaccccgacagccagcccggcatcctgcgccgg
cgctgcgggcgcggcttcagctatatcgcccccgacggcacacggatcgacgccgccgag
gaacgcgcccggatcagggcgctggcggtgcccccggcctacgaacaggtgtggatctgc
ccgcgcgccaacggccacctgcaggccaccggccgcgacgcgcgggaccgcaagcaatac
cgctatcaccctgactggacggcatttcggtcggagcgaaaatatgggcatctcgccgag
ttcggtgctgccctgcctggcctcagacgcagcatactcggccagctccgcgcccgcgat
cccggcgacagggagttcgctctggccgccactctggcacttctggatcgcgccgggctg
cgcgtcggcaatgccgattacgcgatggagaacggcagctacggggcgaccacgctgcgc
ggcacgcacctgcggctcgacggcgccacgctgcacctgcgcttccccggcaagggcggc
aagcgcgtccacaagcaactgaaggaccgcactctgcagcgcgccctcaccgcgctcggc
gacctgcccggcaaggagctgatcgcctggctcgacgaggatggccagccgcacggattg
cgctccgacgagatcaaccgctggctggccgagcgcaccggcaacccggcgctcaccgcc
aagaccttccgtacctggaacggcagcgtcgcggcgctggaggcggcgcggagcgcggag
cgggtcagcatcaaggcgatggccgaggcggcggccgagcggctggccaatacgccgacc
gtggcgcgcaactcctacatccatccggaggtgatcgcccttgccgagaccggcctgccg
aaggctctggatcgcgcgccagatcgcccggggctgcgccggtccgaggcgcagctgctc
gcccttttggaacgctga
DBGET
integrated database retrieval system
