Alloyangia pacifica: CEW88_11390
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Entry
CEW88_11390 CDS
T05431
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ypac
Alloyangia pacifica
Pathway
ypac02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ypac00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CEW88_11390
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ypac02000
]
CEW88_11390
Transporters [BR:
ypac02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CEW88_11390
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
UBA_2
Motif
Other DBs
NCBI-ProteinID:
AWI84236
UniProt:
A0A2U8HGS6
LinkDB
All DBs
Position
1:complement(2365611..2366723)
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AA seq
370 aa
AA seq
DB search
MKRTKTLLATTALTVAAGAVSAQEMANDMTLVSWGGAYQTSQIKAYADPYKEMHPEVNIS
WDESSAEAVAKLRAMNEAGNITWDLVDVVASDAIRLCDEGLAMEYDPDELLAEADDGTSA
EDDFGDMIVSDCFIPQIVYSTTFGYRTDMVPEGADAPSDICSIFDLETYPGKRSLEKRPI
NNMEWALYCDGVAKDEIYDVLATPEGQDQALAKLDTIKDSVVWWSAGADTPQLLADGEVF
MGSTYNGRLFSVIEEQDQPVAMMWDMQVFDLDGWIIPEGLDDAALARVKDFVKFATDTQR
LADQAAYISYGPARQSSAPLVGQHADLGIDMAPHMPTDPANATNTLLYNYEFWADYRDDI
DAKFQAWLAQ
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggaccaagaccctcctggccaccaccgcgctcacggttgccgcaggcgccgtc
tccgcgcaggaaatggccaacgacatgaccctcgtgtcgtggggcggcgcgtatcagacg
agccagatcaaggcctatgccgacccctacaaggaaatgcaccccgaggtgaacatctcc
tgggatgaaagctcggccgaagccgtggcaaagctgcgcgcgatgaacgaggccggcaac
atcacttgggacctcgtcgacgtcgtggcctctgacgccatccgcctgtgcgacgaaggc
ctcgccatggaatacgatcccgacgagctgctcgccgaggcagatgacggcacctcggcc
gaggacgacttcggcgacatgatcgtctccgactgcttcatcccgcagatcgtctattcg
accaccttcggttaccgcaccgacatggtgcccgagggcgcggatgcgccgtcggacatc
tgctcgatctttgatctcgagacctacccgggcaagcgctcgctcgagaagcgcccgatc
aacaacatggaatgggcgctgtactgcgacggcgtggccaaggacgagatctacgacgtt
ctggctaccccggaaggccaggaccaggcgctcgccaagctcgacaccatcaaggacagc
gtcgtgtggtggtccgctggtgccgacacaccgcagcttctggcggacggcgaagtcttc
atgggctcgacctacaatggccgcctgttctcggtgatcgaggagcaggaccagccggtc
gccatgatgtgggacatgcaggtgttcgatctcgacggctggatcatccccgaaggcctt
gacgacgccgctctggcgcgcgtgaaggacttcgtgaagttcgccaccgacacccagcgt
ctggccgatcaggccgcctacatctcctatggtccggcacgccagtcgtccgctccgctt
gtcggtcagcacgccgacctgggcatcgacatggcgccgcatatgccgaccgatccggca
aacgcgacgaacacgctgctctacaactacgagttctgggcggactatcgcgacgacatc
gacgcgaagttccaggcctggctcgcgcaataa
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