Alloyangia pacifica: CEW88_11470
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Entry
CEW88_11470 CDS
T05431
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ypac
Alloyangia pacifica
Pathway
ypac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ypac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CEW88_11470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypac03400
]
CEW88_11470
Enzymes [BR:
ypac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CEW88_11470
DNA repair and recombination proteins [BR:
ypac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CEW88_11470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AWI84249
UniProt:
A0A2U8HEC9
LinkDB
All DBs
Position
1:complement(2382316..2383104)
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AA seq
262 aa
AA seq
DB search
MSFTLATWNINSVRLREPIVLKLLAEEGPDVLCLQETKSPVDKIPLEQFAALGYTHIVAR
GQKGYNGVAILSKLPLLDAGDQDFATLGHARHVAAKLENGVTIHNFYVPAGGDEPDREVN
EKFGQKLDYLTEMRDWFHAHKPEKSILVGDLNIAPREDDVWSHKKLLKIVSHTPIEVEHL
AQAQDAGEWVDITRQDIPEGQLYSWWSYRARDWDAADKGRRLDHVWATPDISNAGHGSRI
LRAARGWEKPSDHVPVFASFDL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcacccttgccacctggaacatcaactcggtccgcctgcgcgagcccatcgtc
ctcaagctgctcgccgaagaggggccggacgtgctgtgtctgcaggagaccaagagcccg
gtcgacaagatcccgctcgagcagttcgcggcgcttggctacacccatatcgtggcgcgt
gggcagaagggctacaacggcgtcgccatcctgtcgaagctgccgctgctagacgccggc
gatcaggatttcgccaccctcggccacgcccgccacgtcgcggcgaagctcgagaacggc
gtcaccatccacaacttctacgtccccgccggcggcgacgagccggaccgcgaggtgaac
gagaagttcggccagaagctcgactacctgaccgaaatgcgtgactggttccacgcccac
aagcccgagaagtcgatcctcgtcggcgatctcaacatcgccccgcgcgaggatgacgtc
tggagccacaagaagctgctgaagatcgtctcgcacacgccgatcgaggtcgagcacctg
gcgcaggcacaggatgcgggggagtgggtcgacatcacccggcaggacatccccgagggg
caactctattcgtggtggtcctaccgcgcgcgcgactgggacgcggcggacaaggggcgg
cggctcgatcacgtctgggcgacgccggatatctcgaatgccggtcacggctcgcgcatc
ctgcgcgccgcgcgcggttgggagaagccctcggatcacgtgccggttttcgccagcttc
gacctctga
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