Alloyangia pacifica: CEW88_13050
Help
Entry
CEW88_13050 CDS
T05431
Name
(GenBank) IS3 family transposase
KO
K07497
putative transposase
Organism
ypac
Alloyangia pacifica
Brite
KEGG Orthology (KO) [BR:
ypac00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
CEW88_13050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
rve
HTH_32
rve_3
HTH_28
HTH_23
HTH_Tnp_1
HTH_29
CENP-B_N
rva_4
rve_2
LZ_Tnp_IS481
Xre-like-HTH
Cas_Cas1
DUF2711
Motif
Other DBs
NCBI-ProteinID:
AWI84724
UniProt:
A0A2U8HFV2
LinkDB
All DBs
Position
2:join(4465..4801,4801..5816)
Genome browser
AA seq
450 aa
AA seq
DB search
MRQKPGTPKPSAEKVVKDIRRRTRKQHSAEEKIRIVLEGLRGEESIAELCRREGIATSLY
YNWSKEFLEAGKKRLAGDTARQASSPEVKVLRAEASALKEALAEATLENRLLKKKYDRGW
GRPRMRYPASEKLEIIRLVERSHLPAARTLEMFGIPKTTFYRWYDRYRSLGEAGLEDRRP
HPGRVWNRIPDAVRQDVVGLALEEPELSPRELAVRFTDTKKYFVSEASVYRILKAHDLIP
SPAFIVVKAADEFRDKTSRPNQLWQTDFTYLKVIGWGWYYLSTILDDFSRYVIAWKLCTT
MRAEDVTDTLQLALEASGCDQPSVLHRPRLLSDNGSSYIAGDLATWLEDKQMEHVRGAPN
HPQTQGKIERWHQTLKNRILLENHYLPGALEAAIETFVDHYNHQRLHESLGNVTPADVYF
GRAKAIVAERRRIKADTIRQRRLLNQTQAA
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagacagaaacccggaacaccgaagccttccgccgagaaggttgtgaaggacatccgc
cgacgcacccgcaaacagcattcggcggaggaaaagatccgcatcgtgcttgaggggctt
cgcggcgaggagagcatagccgagctttgccggcgcgaggggattgcgacgagcctgtac
tacaattggtccaaagagtttctcgaggccggcaagaagcggcttgctggtgacacggcg
cgccaggcgagtagcccggaagtgaaggtcctgcgggctgaggccagcgcgctgaaggag
gccttggcagaggccacccttgagaaccggctgctcaaaaaaaagtatgatcggggatgg
gggagaccacgaatgaggtaccctgcatccgaaaagctcgagattatccggctcgtcgag
agatcacatctgcccgcggcgcgcacgctggagatgttcggtattccgaagacaaccttc
tatcgttggtacgaccgataccgatcccttggcgaggccggtctcgaggatcgccgaccc
catccgggtcgggtctggaaccgcatccctgatgctgtccggcaggatgtggtcggcttg
gcgctggaggagcccgaactctctccaagggagcttgcggtgcgcttcacagatacgaag
aagtactttgtctcagaggcttcggtgtatcgcatcctcaaggcgcacgacctgatcccg
agccctgccttcatcgtggtcaaggctgcggacgagttccgcgataagacgagccggcca
aaccagctctggcagaccgacttcacgtacctgaaggtgatcggttggggttggtactat
ctgagcaccatcctggatgacttcagccgatatgtaatcgcctggaagctctgcacgacc
atgcgggccgaagatgtcactgacacgctccagctcgcgctggaggcgtccggttgcgac
cagccgtccgtgctacaccgaccacgacttctcagcgacaacggctcgtcctacatcgca
ggcgatctcgcaacctggctggaagacaagcagatggagcatgtgcgcggggcccccaac
catccgcagacgcagggcaagatcgaacgctggcaccagaccctgaagaaccgcatcctg
ctggagaaccactacctccccggcgcactcgaggccgcgatcgagaccttcgtcgaccac
tacaaccatcaacggctccatgagagcctcggaaacgtcaccccggccgacgtctacttc
ggtcgtgccaaagccatcgtagccgaacgaaggaggatcaaggccgacaccatccgccag
cgccgcttgctcaaccaaacccaggcggcataa
DBGET
integrated database retrieval system
