Alloyangia pacifica: CEW88_13085
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Entry
CEW88_13085 CDS
T05431
Name
(GenBank) DNA helicase UvrD
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ypac
Alloyangia pacifica
Brite
KEGG Orthology (KO) [BR:
ypac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypac03400
]
CEW88_13085
Enzymes [BR:
ypac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CEW88_13085
DNA repair and recombination proteins [BR:
ypac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CEW88_13085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
AAA_30
UvrD_C_2
AAA_11
Flg_hook
Motif
Other DBs
NCBI-ProteinID:
AWI84730
UniProt:
A0A2U8HGJ7
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All DBs
Position
2:13141..16281
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AA seq
1046 aa
AA seq
DB search
MTFQIVGAGAGAGKTWHIQETLKEWVTEDAIRPERILAVTFTETAASELKGRIRGALLAE
SRLEEAAAIERAYVSTIHSLGNRILTEHAFAAGLSPSLRLIEDAEAELLLRRAMADAETL
RVFTDDLAAHGYAWSYTGGDATDTFRRDLRAAIAKLNELGEFGDDPKLPARAAEALKTDW
PKTDASGDKLDAGLRRSIEAMLKAFPDGIVDWAKSAAATNDFTSNYRDLQRGLSDHTYTD
WAWWQRLTSLRVKNNRQPTPEGYDDLAEAVMQAAGALARHPGPKNEAAQRLQLLLAGAQE
VRRLFAQAKERLGVVDFGDMIARAEALLRARPEAVAAMMDGIDCVIVDEFQDTNPVQFAL
LAHLIKAAPRVVLVGDGKQAIMGFQGADARLAAALAAQRPNAAHTLDTNRRSVPGIMNLV
NDLGAGLFSDYAPLAPHRSAAGGPPIDVMRVENKTATSKGAPLAKGSHHIAERIRSLLEE
KRTIIDRTTNTPRPMQPSDVAILCRTHSKARDYADCLTQLGIPVDLAEDGWFTSEVVTVA
RAALAVIADPSDAFSAVIFLTHGPAAVSLEAALTAVLDGNLAAHPALASLEALQDHASSW
TATRLLAGLRTDAGLDDWAAGLEDPARAHADLARLDAEAAAFEAADPVTRAASGVFGWDI
RSFLAWLAIRADAGDNARPDPSGSTARGVKIATWHASKGLEWPVVCVTGLDWTVGERANT
LRIEFTGWDVPETLLEGATIHYHPVVACREVAEHFAAVRREPAAVTERCLSYVAMTRARD
LLVLEWPDYVKEDADTVSRLLVEEGKLELGTGEITVGKSKHPARLTNHGKAFPGSFADKG
IETATEAEVRPGRPETPGPRGAPLFLRPSDGGEATALWSLETHALGAALPREAFDDASLR
GSALHLAMRVFLQRPDRAIDLSAATGLSPETLAALKEQARSLRQTLAEHGFTDLHPELPF
DTEIAGGTRVRGTVDLLGLSQDGREAVIIDYKSPAPESPVEAAQPYLAQLGAYVGALSTL
RPETRLARAGIHFLGSGTLAWGSPSM
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgacattccagatcgttggggcaggcgccggtgcgggcaagacctggcatatccaagag
acgcttaaggaatgggttaccgaagatgcaatcagacccgaacgcatcctcgccgtgacc
tttaccgagacggccgcctctgaactcaagggccgcatccgcggggccttgctggcggaa
agtagactggaggaggctgctgcgattgagcgggcctatgtttccaccatccactccctc
ggaaaccggattctgaccgagcatgccttcgccgcaggcctctccccctcgttgcggctg
atcgaggacgcggaggccgaactgctcctgcgaagggcaatggccgatgccgaaacactc
agggtcttcaccgatgatctcgcggcacatggctacgcctggagctacacaggcggcgac
gccacggacacattccgccgtgaccttcgtgcagccatcgccaagctgaacgagcttggg
gaattcggcgacgatccgaaactgcctgcgcgtgcggccgaagccttgaagaccgactgg
ccgaagacggacgcgagcggcgacaagctggatgcaggcctgcgtcgctccatcgaagcc
atgctgaaggccttcccagacggaattgtcgattgggcaaagagcgccgccgcgacaaac
gacttcacatcgaactatcgtgaccttcagcgcggactttcggaccatacgtacaccgac
tgggcctggtggcagcgtctcacgagccttcgggtgaagaacaaccgccagccaaccccg
gagggctacgacgatctcgccgaagctgttatgcaagccgcaggggcattggcccgccat
cccggcccgaagaatgaagcggcccaacgcctgcagttgctgcttgcgggcgcgcaagaa
gtgcgacgccttttcgcacaggccaaagagcggctcggtgtggtggatttcggcgacatg
atcgcccgggcagaggcccttctgcgtgcccgtcccgaagctgtcgcggccatgatggac
gggatcgactgcgtgatcgtggacgaattccaggacaccaaccccgttcagttcgccctt
ttggctcatctcatcaaggccgccccccgcgtcgtcctggtcggggacggcaaacaggcc
atcatggggttccagggggctgacgcgcgcctcgcggcggcccttgctgcccagcgcccc
aatgctgcgcatacgttggacaccaaccggcggtctgtccccgggatcatgaacctcgtg
aacgatctcggcgcagggctcttttcggattacgcgcctctggcaccgcatcggagtgcc
gctggcggtccaccgatcgacgtcatgcgtgtcgagaacaagaccgcgaccagcaaggga
gcacccctagccaagggctcgcatcacatcgccgagcgcattcgaagcctgttggaagag
aaacgtacgattatcgaccggacgacgaatacgccccgtcccatgcagccttcggatgtc
gccatcctgtgccgcacgcattccaaggcgcgggactatgcagactgccttacgcagctg
ggcattcccgtggacctcgccgaagacggctggttcacctcagaagttgtcaccgtcgcc
cgcgcggcccttgccgtaatcgccgatccgtctgatgcgttctccgccgtcatcttcttg
acacatggcccggcggcagtatcgctggaggccgctctaactgctgtgctggatggcaac
ctcgccgcgcatccagcgttggcttctctcgaagcgttgcaggaccacgcatccagctgg
acggcaacaaggctgctcgcagggctgcgaaccgacgccggccttgatgattgggccgcc
gggctggaggatcccgcccgcgcccacgccgaccttgcccgccttgatgcagaggccgca
gccttcgaggccgcagaccccgtcacccgtgcggcctcgggtgtcttcggttgggatatt
cgatcctttctcgcatggctcgcgatccgcgcggatgcgggcgacaatgcacgtcctgat
ccgagcggttcgacagcgcgcggcgtgaagatcgcgacctggcacgcgtcaaaggggctt
gaatggcccgtggtctgtgtgactggcctcgactggaccgtcggagagcgcgccaatacc
cttcgcatcgaattcaccggctgggacgtcccggaaactttgctcgagggggccacgatt
cactatcatccggtcgtcgcttgccgggaggtggccgaacatttcgcagctgtccgccgc
gagcccgccgcggtaacagagcgctgcctgtcctatgttgccatgacacgcgcacgggat
ctgctggttctggaatggccagactacgtgaaggaagacgcggacacggtttcacgactg
ctggtcgaagaagggaagctcgaactcggaaccggagaaatcactgtcggaaagtcgaag
catcctgcgcgtctgaccaaccatggcaaggccttccccgggtccttcgctgacaaaggc
atcgaaacagcaaccgaagctgaagtccgacccggtcgcccggaaactccaggtccgcgc
ggcgcgcctctcttcctgcgtccatccgacggcggtgaggcgacagcgctatggtctctc
gagacccatgcccttggtgccgctctcccgcgcgaggcgttcgacgatgcaagcctgcgc
ggaagcgcgcttcaccttgccatgcgagtctttctacagcgccctgaccgggcaattgat
ctgagcgcagcaaccggcctctcgccagagaccctcgcagctctcaaggaacaggcgaga
agcctgcgtcagacattggcagagcatggcttcaccgacttgcaccctgagcttccattc
gacacagagattgcaggcggcacccgggtccgcggcacggtcgatctcctcggcctgagc
caagatgggcgagaagcagtgatcatcgactacaagtcgcctgcaccggaatcccctgtc
gaagctgcccagccgtaccttgcccaactcggagcatatgtcggcgcactttcgacgctc
cgccctgaaacccggctggcgcgtgcgggcatccactttctagggtcgggcacgcttgca
tggggctcgcccagcatgtga
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