Alloyangia pacifica: CEW88_21485
Help
Entry
CEW88_21485 CDS
T05431
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
ypac
Alloyangia pacifica
Pathway
ypac00860
Porphyrin metabolism
ypac01100
Metabolic pathways
ypac01240
Biosynthesis of cofactors
Module
ypac_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
ypac00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
CEW88_21485 (cobD)
Enzymes [BR:
ypac01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
CEW88_21485 (cobD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CobD_Cbib
AmpE
DUF1453
Motif
Other DBs
NCBI-ProteinID:
AWI86349
UniProt:
A0A2U8HK58
LinkDB
All DBs
Position
unnamed2:20192..21133
Genome browser
AA seq
313 aa
AA seq
DB search
MSFALMMLGGMVLDLLLGWPERLYARIGHPVTWLGKGISALERRLNRGNRRRRLWLGALT
TLSTVALAALPGVAVQALLPDSVAGSLLGAVLAWPLIALRAMHAHVAAVATPLARGDLGA
ARHAVSMIVGRDPAQLDPAGIARAATESLAENSSDGIVAPLFWGAVAGLPGIAAYKAVNT
LDSMIGHRNDRYEAFGKVAARLDDVANWLPARLTGVLFALASGRRLPAALRVMGRDARKH
RSPNAGWPEGAMAAALDVRLSGPRVYGERIAEEPWLNAGAPDPTPQGLSRALRLYRRAMA
LCALALAALVLFE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagctttgcgctgatgatgctgggggggatggtgctcgatctgctgctgggctggccg
gagcggctctacgcgcggatcggccatccggtgacatggctgggcaaggggatctcggcg
ctcgagcggcggctcaaccggggcaaccggaggcgcaggctctggctcggggcgctgacc
acgctgtcgaccgtcgcccttgccgcgctgcccggcgttgccgtgcaggcgctgctgccg
gacagcgtcgcgggcagcctcctcggcgcggtcctcgcctggccgctgatcgccctgcgc
gcgatgcacgcgcatgttgccgccgtcgccacaccgctggcgcggggcgacctcggagct
gcccgccacgccgtctcgatgatcgtggggcgcgacccggcacagctggacccggcgggg
atcgcccgcgccgcgacagagagcctcgccgagaacagctcggacggcatcgtcgcgccg
ctcttttggggggcggtggcgggtctgccggggatcgccgcctacaaggccgtgaacacg
ctcgattcgatgatcggccatcgcaacgaccgctacgaggccttcggcaaggtcgcggcc
cggctcgacgacgtggccaactggctcccggcgcggctcaccggggtgctcttcgccctc
gccagcggccgccgcctgcccgcggcgcttcgggtgatggggcgcgatgcgcgcaagcac
cgctcgcccaacgcgggatggcccgagggcgccatggccgcggcgctggatgtccgtctc
tcggggccgcgcgtctatggcgaacggatcgccgaggagccctggctcaacgccggcgcc
cccgatccgacgccgcagggtctcagccgcgcgctgcgcctctatcgccgggccatggcg
ctctgtgcccttgcgctcgccgcgctggtcctgttcgagtga
DBGET
integrated database retrieval system
