KEGG   Yersinia pseudotuberculosis PB1/+ (serotype 1B): YPTS_0051
Entry
YPTS_0051         CDS       T00744                                 
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ypb  Yersinia pseudotuberculosis PB1/+ (serotype 1B)
Pathway
ypb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ypb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    YPTS_0051
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ypb03400]
    YPTS_0051
Enzymes [BR:ypb01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     YPTS_0051
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     YPTS_0051
DNA repair and recombination proteins [BR:ypb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     YPTS_0051
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS Zn_ribbon_6 zf-dskA_traR
Other DBs
NCBI-ProteinID: ACC87050
UniProt: B2JYN6
LinkDB
Position
55262..56071
AA seq 269 aa
MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILTLSDQPVLSVQRRAKYLL
LELPKGWIIIHLGMSGSLRVLSEETAAEKHDHVDLVVSNGKILRYTDPRRFGAWLWAKDL
ETSNVLAHLGPEPLSDEFTAQYLFDKSRNKRTLIKPWLMDNKVVVGVGNIYASESLFAAG
ILPDRAAGSLTDAESVLLVATIKAVLLHSIEQGGTTLRDFLQSDGKPGYFAQELQVYGRA
GEPCRQCGHPIEIAKHGQRSTFFCRHCQH
NT seq 810 nt   +upstreamnt  +downstreamnt
atgcctgaattaccagaagttgaaaccagccgccgcgggatcgaaccttatcttgtcggc
cagacaatcctttatgctgtggtcagaaatgcccgtttacgctggccggtatccgatgaa
attctaacacttagcgatcaacccgtactgagtgtccaacgccgggcgaagtatttactg
ctagagctgcctaaaggctggatcatcatacatttaggtatgtcaggtagcctgcgcgta
ttatctgaagagactgcagctgaaaagcacgatcatgtcgatttggtggtcagtaacgga
aaaatattgcgttataccgacccacgacgttttggtgcctggttgtgggcgaaagacctt
gagaccagtaatgtattagcccatttagggccagaaccactaagtgatgaatttactgcg
caatatctgttcgataaatcacgtaataaacgcacattgattaaaccgtggttgatggat
aacaaagtggtcgtcggagtgggtaacatttatgcgagcgaatcactgtttgctgctggg
attttgccagatcgtgccgcaggctcattgactgacgctgaatccgtattgctggtagca
acgataaaagccgtgttattgcattcgattgagcagggcggcaccacattacgtgatttt
ctgcagtcggatggtaaaccagggtatttcgcgcaagagttgcaggtctatgggcgtgcg
ggtgaaccatgtcggcagtgtgggcatcccattgaaatagcgaaacacgggcagcgcagc
acgttcttttgccgccactgccagcattga

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