Yersinia pseudotuberculosis PB1/+ (serotype 1B): YPTS_0767
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Entry
YPTS_0767 CDS
T00744
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ypb
Yersinia pseudotuberculosis PB1/+ (serotype 1B)
Brite
KEGG Orthology (KO) [BR:
ypb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ypb03016
]
YPTS_0767
Enzymes [BR:
ypb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
YPTS_0767
Transfer RNA biogenesis [BR:
ypb03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
YPTS_0767
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ACC87751
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All DBs
Position
complement(863593..864168)
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AA seq
191 aa
AA seq
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MTNTVDELKRVRRLFFALTLPDAMQQEIVQWRAGHFSPEAGRPVAAANLHLTLAFLGEVS
ATKAQVLQQQAGRIQQAGFSVTLDDIGHWPGSGVIWLGCKNPPRGLLQLAQLLRSQAARS
GCYQTPLPFHPHVTLLRNATRPVALPAKSGNETFQADHFSLYESVFARGRTRYNIVQSWP
LAGSERKPDAC
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgacaaataccgttgacgaattaaaacgtgtccgccgcctattctttgccctgacactg
ccagatgccatgcaacaagagattgtgcaatggcgagctggccatttctcgccagaggcg
ggtcgccctgtcgcggcggcgaatctgcacctgacactggcgttccttggtgaagtcagt
gcgacaaaagcccaggtgttacagcagcaagccgggcgtatccaacaagcaggtttcagc
gtgacattagatgatatcggccattggcccggttccggcgtgatttggctgggatgtaag
aacccccctcgtggcctgttgcaattggcgcagttgctgcgctcccaggcagcacgtagt
ggctgttatcaaacgccgctgccgtttcatccccatgttactctgttgcgtaacgcaacc
cgcccagtggcattacctgccaagagcggcaatgagaccttccaggcggaccatttctcg
ctgtatgaatcggtcttcgcgcggggccgcacccgctataacatcgtacaaagctggccg
ctggctggcagtgaaaggaaaccagatgcctgctaa
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