Yersinia pseudotuberculosis PB1/+ (serotype 1B): YPTS_1003
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Entry
YPTS_1003 CDS
T00744
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ypb
Yersinia pseudotuberculosis PB1/+ (serotype 1B)
Brite
KEGG Orthology (KO) [BR:
ypb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ypb03032
]
YPTS_1003
03036 Chromosome and associated proteins [BR:
ypb03036
]
YPTS_1003
03400 DNA repair and recombination proteins [BR:
ypb03400
]
YPTS_1003
DNA replication proteins [BR:
ypb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
YPTS_1003
Chromosome and associated proteins [BR:
ypb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
YPTS_1003
DNA repair and recombination proteins [BR:
ypb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
YPTS_1003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ACC87984
LinkDB
All DBs
Position
1139851..1140123
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAAGADISKAAAGRALDAIITSVTESLKEGDDVALVGFGTFAVRERSARTG
RNPQTGKEISIPAAKVPGFRAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagtcacaactgatagacaaaattgccgcaggtgctgatatttctaaagcggcc
gctgggcgtgcgttagatgcaattattacttctgttactgaatccttgaaagaaggggat
gatgtggctctggttggttttggtacttttgcagtacgtgagcgttctgcacgtactggc
cgtaacccgcagacaggtaaagaaattagtattccagccgctaaagtaccgggttttcgt
gccggtaaaggcctgaaagacgcagtaaactga
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