Yersinia pseudotuberculosis PB1/+ (serotype 1B): YPTS_1343
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Entry
YPTS_1343 CDS
T00744
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ypb
Yersinia pseudotuberculosis PB1/+ (serotype 1B)
Brite
KEGG Orthology (KO) [BR:
ypb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ypb03032
]
YPTS_1343
03400 DNA repair and recombination proteins [BR:
ypb03400
]
YPTS_1343
Enzymes [BR:
ypb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
YPTS_1343
DNA replication proteins [BR:
ypb03032
]
Prokaryotic type
DNA Topoisomerases
YPTS_1343
DNA repair and recombination proteins [BR:
ypb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
YPTS_1343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ACC88318
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Position
1497067..1499742
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AA seq
891 aa
AA seq
DB search
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEIRMSKIAHELLADLEKDTVDFVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLSEVIDGCLAYIEDENISIEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKV
YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNNLYSLTQLQVTFGINMVALSQGQPKLLNLKDILVAFVRHRRE
VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRASTPAEAKAGLIASPWELGNV
ASMLERAGDDAARPEWLEAEFGIRDGKYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLTLIGELIFILENPDRLMEVIREELVAIKEQYNDLRRTEITANTSDINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPVREYEEGRHVFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSALGKVVRFPEGQVRSMGRTATG
VRGINLNGDDRVISLIIPRGDGEILTVTENGYGKRTAVAEYPTKSRATQGVISIKVSERN
GKVVGAVQVAPTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAEDEHVVGLQRVA
EPEEDDDILDGESSEGEEGSEENAALNAPSDDVADEDTDAEDDTDVEDDNA
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaataacaccggtcaacatcgaggaagagctgaaaagctcc
tatctggattatgcgatgtccgttattgtcggacgtgcgttaccagatgtccgtgatgga
ctgaaaccggtgcaccgtcgcgtactgtttgcgatgaatgtactgggtaatgactggaat
aaaccatacaaaaaatcggcccgtgtagtcggggacgttatcggtaaataccacccgcat
ggtgacagcgcggtctacgacactatcgtgcgtatggcccagccgttctcactgcgctat
atgctggtggatgggcagggtaacttcggttccgtcgatggtgactccgccgcggcgatg
cgttataccgaaatccgtatgtctaaaattgctcacgaattgttagcggatttagaaaaa
gataccgttgacttcgtgcctaactatgatggtacggaacaaattccggctgttatgccg
accagaatccctaacctgctggtgaacggttcgtcgggtattgcggtagggatggcaacc
aatattccgccacataatctttctgaggttattgatggctgtctggcttatatagaagat
gaaaacatcagcattgaagggctgatggagtatatccctggcccagacttcccaacagca
gccattattaatggccgccgtggtattgaagaggcttatcgtactggtcgcggtaaggtc
tatatccgcgcacgtgctgaagtcgaagcggatgccaaaacgggccgtgaaaccattatt
gttcatgagatcccgtatcaggtgaacaaagcacggttgattgagaaaatcgccgagctg
gtaaaagaaaaacgtgtcgaaggcatcagcgcgttacgcgatgagtctgataaagacggc
atgcgcatcgtgattgaaatcaaacgtgatgcggtcggggaagtggtgctgaataacctc
tactctctgacacaattgcaggtgactttcggtatcaatatggtggccttgtctcagggg
caaccgaagctgcttaacctgaaagacattctggttgcttttgttcgtcaccgtcgtgaa
gtggtgactcgccgtaccatttttgaactgcgtaaagcacgtgatcgcgcccatatcctt
gaagcgttggcgattgcactggctaacattgatccgattatcgaattgattcgccgtgca
tcgacccctgcggaagcaaaagccggtttgattgccagtccttgggagttaggtaacgtt
gcttccatgctggaacgtgctggtgatgacgcggcccgccctgagtggctggaagcggaa
tttggtatccgtgacggtaaatattaccttaccgagcaacaggctcaggctattttggat
ctgcgtttgcagaaactgacaggtctggagcatgagaaactgctggatgagtataaagag
ctgctcaccttaattggcgaactgatctttattctagaaaatccggatcgcctgatggag
gttatccgcgaagaattagtggcgatcaaagagcaatataacgatcttcgtcgcactgag
atcaccgcgaatacctctgatatcaatattgaagacctgattaatcaagaagatgtggtt
gtgacgttgtcccatcagggctacgtcaaataccagccgttgagtgattatgaagctcag
cgtcgtggtggtaaaggtaaatctgctgcacgtatcaaagaagaagactttattgatcgc
ctgctcgttgccaatacccacgataccatcttgtgcttctccagccgtggccgtctctat
tggatgaaggtctatcaactgccggaagccagccgtggggctcgtggccgtcccatcgtc
aacttgttgccgcttgagccaaatgagcgtattaccgccattctgcctgtgcgcgaatat
gaagaaggccgtcatgtctttatggctaccgccagcggtactgtgaagaaaacggcattg
acggagttcagtcgcccacgtagcgccggtattatcgccgttaatttgaacgaaggtgat
gagcttatcggtgtggatctgacggatggcagcaatgaagttatgctgttctcagcattg
ggtaaagtggttcgtttcccagaagggcaggttcgctctatgggccgtaccgcaaccggt
gtccgtgggatcaacctcaatggcgatgatcgggttatttctctgatcattcctcgtggt
gatggtgaaatcctgaccgtaactgaaaacggttatggtaagcgtactgcagtggcagaa
tatccaactaagtcccgtgcgactcagggggttatctccattaaagtcagtgagcgtaat
ggtaaggttgtcggtgctgttcaagttgcaccaactgaccaaatcatgatgatcactgat
gctggcacactggtacgtactcgcgtatccgaagtgagtgtcgtagggcgtaatacccaa
ggtgtgaccctgatccgtaccgcagaagatgaacatgttgttggtttgcaacgtgtcgct
gaacctgaagaggatgatgatatccttgatggcgaatcatcagaaggtgaagagggcagc
gaagaaaacgcggcactaaatgcaccatcagatgatgttgccgatgaagacactgatgca
gaagacgacactgatgtagaagacgacaacgcataa
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