Yersinia pseudotuberculosis PB1/+ (serotype 1B): YPTS_1843
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Entry
YPTS_1843 CDS
T00744
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
ypb
Yersinia pseudotuberculosis PB1/+ (serotype 1B)
Pathway
ypb02020
Two-component system
ypb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ypb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
YPTS_1843
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
YPTS_1843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ypb03021
]
YPTS_1843
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ypb02035
]
YPTS_1843
Transcription machinery [BR:
ypb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
YPTS_1843
Bacterial motility proteins [BR:
ypb02035
]
Flagellar system
Flagellar assembly proteins
Stator
YPTS_1843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
YcbB
UPF0147
Motif
Other DBs
NCBI-ProteinID:
ACC88810
LinkDB
All DBs
Position
2073239..2073961
Genome browser
AA seq
240 aa
AA seq
DB search
MSDLYTAEGVMDKNSLWKRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYD
ALQGTAFTTYAVQRIRGAMLDELRSRDWAPRSVRRNAREVASAMQQVEQRVGRPATEQEV
AQVLDIGLVEYRQILLDTNNSQLFSYDEWREEHGESVEPLLEGHEDANPLKHLLEGNLRQ
RVIEAIEALPEREKMVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRARLNNDA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgatttgtataccgccgaaggcgtgatggataagaattccctctggaaacgctat
gttcctttggttcgccatgaagcattgcgtctacaggtgcgtctacccgccagcgtggag
ttggacgatttattgcaggctggggggattggcctgctgaatgctgtcgagcgctatgat
gctttacaaggcaccgcgtttactacgtatgcggtacagcgcatacggggggcgatgctt
gatgaactgcgtagccgtgattgggcacctcgcagtgtgcgccgtaatgcacgggaagtg
gccagtgccatgcagcaagtcgaacagcgagtagggcgtccggcgaccgaacaggaagtc
gcgcaggttcttgatattggcttggttgagtaccgccagatcctgttggacaccaacaat
agccaacttttctcctacgacgaatggcgtgaagagcacggcgaaagtgtcgaacccctg
ttggaagggcatgaagatgccaatccactaaaacacttgttggaaggtaatctgcgtcag
cgcgtgattgaagcgatagaggcgttgccagaacgcgaaaaaatggtgcttacgttgtat
taccaggaagagctgaatttgaaagaaattggtgcggtgcttgaagttggggagtcccgc
gtcagtcaacttcatagccaagcgataaaacgcttacgcgcccgcctaaataacgacgct
taa
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