Yersinia pseudotuberculosis PB1/+ (serotype 1B): YPTS_2270
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Entry
YPTS_2270 CDS
T00744
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ypb
Yersinia pseudotuberculosis PB1/+ (serotype 1B)
Brite
KEGG Orthology (KO) [BR:
ypb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ypb03000
]
YPTS_2270
Transcription factors [BR:
ypb03000
]
Prokaryotic type
Helix-turn-helix
Other families
YPTS_2270
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
AAA_2
AAA_5
HTH_7
Mg_chelatase
HTH_30
AAA
AAA_3
HTH_23
Xre-like-HTH
HTH_28
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
ACC89231
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Position
complement(2504173..2505924)
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AA seq
583 aa
AA seq
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MQGNLSAASTPTTACNQRLRDSWLRSQLYGLDRMSDDVPRIEQGELADLLVSHAVLQQSV
VVLADASGLVLNTFGDIQALQKAQQFALTPGNLWSECSRGTNAIGTALAIDDSCEIYGHQ
HYLINNQGLYCAAMPLQAPNGQIAGVLDISGPAYHSHPHTLAWIKNAAKQIEYLWVKQSL
HPDQWLMSLHPQIQGIDNIEELLLVFSDNTLMAANRLAMHELALGADQFGALTFQQLFPQ
SKQVANQVPHPLMARNQQRYFFRLRAPARSHFPAIIHVPTTSVTSPDLSFSLRDDDKKMV
RLLNAGVSLCINGETGSGKEYVSRALHQQSRWRQGKFVVINCAAIPESLIESELFGYQPG
AFTGASKNGYIGKIREADGGVLFLDEIGDMPLSLQTRLLRVLQEKEVTPLGSSRSWPVNF
AVVCATHRDLPQLVAEGGFREDLLYRLQEFSLTIPPLREWPALPAFILQLWRALGGEQRG
IRFTPALLDTLAKHPWPGNVRQLQSLLKVLFALADDDEVLDCETLPDNFRGENSEPYPAL
QQHDKQFIEKTLQYFNGNISKTAKALGIARSTLYRRAAREKRQ
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcagggaaatttatcagccgccagcacgcccactacggcgtgcaatcaacgactccgt
gactcttggctgcgtagccaactctacggtttagatcgcatgtccgacgatgttccccgt
attgagcagggagaactggccgacttgctggtcagtcacgccgtattacagcaatcggta
gtggtcctcgccgatgccagtggattggtattgaataccttcggcgatatacaggctcta
caaaaagcacaacagtttgccctgacgcccggtaatctatggagtgaatgcagccgagga
acgaatgccattggtactgccctggcgattgatgatagctgcgaaatctatgggcatcag
cattatcttattaacaatcaggggctttactgcgcggctatgccactgcaagcgcctaac
ggacagattgccggtgtgctggatatatcgggtccggcgtatcactcccatccccacaca
ctggcatggataaaaaacgcggcgaaacaaattgagtatttatgggtgaaacagagcctg
catccagatcagtggctgatgagtctgcatccacaaatacaaggcattgataatattgaa
gagctactactggtgttctctgataacactctgatggcagctaaccgtctggcgatgcac
gagttggcgttgggggccgaccagtttggtgccctaaccttccagcaactttttccgcaa
agtaagcaagttgccaatcaggtgccgcaccctttaatggctcgcaatcaacaacgttat
ttctttcgcctacgggcgccagcacgaagccacttccctgcaataatacacgttcccaca
acatcggtaacttcgcctgacttatccttctcactgcgcgatgacgataagaaaatggtg
cgattactcaatgctggcgtctcgctttgtataaatggtgagactggcagtggtaaggag
tatgttagccgggctttacatcagcagagccggtggcggcaaggtaagtttgttgttatc
aactgcgctgccataccagagtctctgattgaatcagaactcttcggataccaaccgggt
gcatttacgggggccagcaaaaatggctatattggcaaaattcgggaggcagacggtggc
gtactgtttctggatgaaataggcgatatgccgttatcgctacaaacccgcttactccga
gtattgcaagaaaaagaggtgacgccgctgggttctagccgtagttggccagtcaatttt
gcggtggtctgtgctacgcatcgggatcttccccagttggtcgcggagggtgggttccgt
gaagacctcctctaccgattgcaagagttctctctaaccattccgccactgcgtgaatgg
cccgcgctgcccgcctttattttacagctatggagggcgttgggcggtgagcaacggggc
attcgctttacgccagcactgcttgatacgctggcgaaacatccctggccgggtaatgtg
cgtcaactgcaaagtttactgaaggtattattcgccctggcggatgacgatgaggttctt
gattgcgagacactgcctgacaacttccgaggtgagaatagtgaaccgtaccccgcgctg
caacagcatgacaagcagtttattgagaaaacactgcaatattttaacggtaacatcagt
aaaactgccaaggctttgggcatagcacgcagtacgctataccgccgtgccgcgcgagaa
aaacgccagtaa
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