Yersinia pseudotuberculosis PB1/+ (serotype 1B): YPTS_3001
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Entry
YPTS_3001 CDS
T00744
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ypb
Yersinia pseudotuberculosis PB1/+ (serotype 1B)
Pathway
ypb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ypb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
YPTS_3001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ypb03019
]
YPTS_3001
03009 Ribosome biogenesis [BR:
ypb03009
]
YPTS_3001
03036 Chromosome and associated proteins [BR:
ypb03036
]
YPTS_3001
Enzymes [BR:
ypb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
YPTS_3001
Messenger RNA biogenesis [BR:
ypb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
YPTS_3001
Ribosome biogenesis [BR:
ypb03009
]
Eukaryotic type
90S particles
RNase
YPTS_3001
Prokaryotic type
rRNA processing factors
YPTS_3001
Chromosome and associated proteins [BR:
ypb03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
YPTS_3001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
DSRM_2
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
ACC89958
LinkDB
All DBs
Position
complement(3333921..3334535)
Genome browser
AA seq
204 aa
AA seq
DB search
MLQALTHRSASSKHNERLEFLGDSILSFVIANELYRRFPRVDEGDMSRMRATLVRGNTLA
EMAREFDLGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIHTIERLILEWYHS
RLEEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVRGEAHDQEFTIHCQVSGLNEPVI
GTGSSRRKAEQAAAEQALKQLELE
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
ttgctgcaagcactgactcatcgtagcgccagcagcaaacacaatgagcgtttggagttc
ctgggtgactctatattaagttttgttatcgccaatgagctatatcgccgtttccctcgc
gttgatgaaggggatatgagtcgtatgcgggccacattggttagagggaatacacttgcc
gaaatggcccgtgaatttgaccttggcgaatgtttacgccttgggccgggtgaattgaag
agtggtggttttcgccgcgaatcaattttagccgatacggtagaagccttaattggcggt
gtattcttagatagcgatatccatacgattgaacggctgatcctcgagtggtatcacagt
cggttagaggaaatcagccctggtgataagcagaaagacccaaaaacgcgcttgcaagag
tatttgcagggccgtcatctgccattaccttcatatctggtcgtgcaggttcgcggcgaa
gcacatgaccaggaatttactatccactgccaggtgagtggcttgaatgaaccagtaata
ggtactggctcaagccgtcgtaaagctgagcaggcggcagcggaacaagcgctgaaacag
ttggagcttgaatga
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integrated database retrieval system
