Yersinia pseudotuberculosis PB1/+ (serotype 1B): YPTS_3158
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Entry
YPTS_3158 CDS
T00744
Name
(GenBank) NUDIX hydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
ypb
Yersinia pseudotuberculosis PB1/+ (serotype 1B)
Pathway
ypb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ypb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YPTS_3158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ypb03019
]
YPTS_3158
Messenger RNA biogenesis [BR:
ypb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
YPTS_3158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
ACC90113
UniProt:
B2JZ69
LinkDB
All DBs
Position
complement(3498198..3498725)
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AA seq
175 aa
AA seq
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MIDDDGYRPNVGIVICNRQGEVLWARRYGQHSWQFPQGGINPGETPEQAMYRELFEEVGL
NKKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQRWFLLQLMCNEAEINMQRSSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFAATVMPVQEVAPPRVPPAYRRKRG
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgatgatggctaccgcccgaatgtgggtattgtaatttgtaatcggcagggt
gaagtattgtgggccaggcgctatggacagcactcttggcagtttcctcaagggggaata
aatcccggtgagacacccgagcaggcgatgtaccgtgaactttttgaagaagtaggattg
aacaaaaaggatgttcggatattggcttcaacccgtaattggttgcgttacaaattacca
aaacgtttggtgcgttgggatacaaagccggtgtgtatcggccaaaaacagcggtggttc
ttactacagttaatgtgtaacgaagccgagattaatatgcaacgtagcagtacaccagaa
tttgatggctggcgttgggtcagctactggtatccggttcgtcaagtggtgtcttttaaa
cgtgacgtttatcgtcgtgtaatgaaagaatttgctgcaaccgtaatgcctgtgcaggag
gtcgctcctccacgggtaccgcccgcttatcgccgtaaaagaggttaa
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