Yersinia pseudotuberculosis PB1/+ (serotype 1B): YPTS_3358
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Entry
YPTS_3358 CDS
T00744
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
ypb
Yersinia pseudotuberculosis PB1/+ (serotype 1B)
Pathway
ypb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ypb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YPTS_3358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypb03400
]
YPTS_3358
Enzymes [BR:
ypb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
YPTS_3358
DNA repair and recombination proteins [BR:
ypb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
YPTS_3358
Prokaryotic type
YPTS_3358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
HHH_8
Motif
Other DBs
NCBI-ProteinID:
ACC90313
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All DBs
Position
3709311..3710570
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AA seq
419 aa
AA seq
DB search
MDRVTSAANAAAASRTKSIRKVPVYSTRTLCCNPALIYLPVGYRYLLMMQAQQFAHVVLD
WYQRFGRKTLPWQLDKTPYQVWLSEVMLQQTQVATVIPYFQRFMLRFPDIQALAAAPLDE
VLHLWTGLGYYARARNLHKAAQMVVEHHQGEFPTTFDQILALPGIGRSTAGAILSLSLGQ
HFPILDGNVKRVLARCYAVDGWPGKKEVEGRLWQISEDVTPANRVGQFNQAMMDLGAMVC
TRSKPKCELCPLNIGCMAYANHSWARYPGKKPKQTLPEKTAWFLLMQNGSQVWLEQRPPV
GLWGGLFCFPQFAEQEELIHWLQKQGIPANETQQLTAFRHTFSHFHLDIVPIWLNTASVR
GCMDDGAGLWYNLAQPPSVGLAAPVERLLHQLLKDPLAKDELTQQQLTKQSPTQPALFD
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggaccgagtaacgagcgccgctaacgccgctgcggcgtcaaggacgaagagtataagg
aaagttccggtttacagcacaagaactctatgctgcaatccagctctcatttatttacct
gtcggatatcgatacctgcttatgatgcaagcgcaacaattcgcgcacgtggtacttgat
tggtaccaacgctttggtcgtaaaaccctgccatggcagttggataagaccccctatcaa
gtatggctgtcagaagtgatgttgcaacaaactcaggttgcgaccgtcatcccctatttt
caacgttttatgctgcgcttccctgatattcaggcactggcggctgcgccgttggatgaa
gtactgcatttatggaccggtttgggttactacgcccgtgccagaaacctgcataaagcg
gcccaaatggtcgtggaacaccatcaaggggagtttcccacaacatttgaccagatactg
gcattgccgggtatcgggcgctcaactgccggggctattttatcgctgtctttaggccag
cattttcctattttggatggcaacgtcaaacgggtgctggcccgttgctatgccgttgac
ggctggccgggaaaaaaagaggtcgaaggccgtctgtggcaaatcagcgaagatgtcacg
cccgccaaccgggtgggccagtttaatcaggcaatgatggatttaggcgcgatggtgtgt
actcgctctaaacctaaatgtgaactttgcccattgaatatcggctgtatggcgtacgct
aaccacagttgggcgcgctatccgggcaaaaaacctaaacagacgttgccggaaaaaacc
gcctggttcttattaatgcaaaatggatcgcaagtgtggctcgaacagcgccccccagtc
ggcttatggggcggcttattctgtttcccacaatttgctgaacaagaagaactcattcac
tggctgcaaaaacagggtattcccgccaatgaaacccagcagttaaccgcgtttcgccat
acgtttagtcatttccatctggatatagtccctatatggctaaatacggcctcagtccga
ggatgcatggatgatggcgcaggtctctggtataacttagcccagccaccttctgtaggg
ttagctgctccggttgagcgtttattgcatcagttattaaaagatccgttggcaaaagat
gagttaacgcaacaacaactcacaaagcaatcgcctacccaaccagctttatttgactag
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