Yersinia pseudotuberculosis 1: BZ23_2555
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Entry
BZ23_2555 CDS
T03679
Name
(GenBank) lysM domain protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
ypc
Yersinia pseudotuberculosis 1
Brite
KEGG Orthology (KO) [BR:
ypc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ypc01011
]
BZ23_2555
Enzymes [BR:
ypc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
BZ23_2555
Peptidoglycan biosynthesis and degradation proteins [BR:
ypc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
BZ23_2555
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM_RLK
LysM3_LYK4_5
NMB0315_dom_I
LysM1_NFP_LYK
DUF3071
LysM_OapA
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AJJ69989
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All DBs
Position
2875373..2876761
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AA seq
462 aa
AA seq
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MKTKAILLASVLLVGCQTSKQDAQAPEQHAQSLSSAGQASEAGEYTNSTREGSARWLESE
SSYAQQDLWNFIKDELKMKVPENSRIREQKQKYLKNKSYLHDVTLRAEPYMYLIVEQIKK
RKMPMELVLLPIVESAFDPHATSSANAAGLWQIVPSTGRNYGLKQNQWYDGRRDVVASTK
AALDILERLNKMFNGDWLLTVAAYNSGEGRVMQAIKANKAKGKPTDFWALSLPRETSIYV
PKMLALGDLLKNSKKYGITLPETDKDRALARVDVDQQIELTQAAEMAGMSLTKLKSFNSG
YKRNVTAPDGHGPRYIMLPKAHAEQLKDSLADTDITAVQPTKLATNSTKSASSSQYKVRP
GDTLSTIAKRLNIKTSDLQSWNNLRAKSTLKVGQTLQLASNTTSKSITYQVRKGDSFASI
AKRHGVNTDDVMRWNSVVSKANNLQPGLKLTLFVNDKSTPEA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccaaagcgatacttctcgcctcagtcttgcttgtcgggtgccagacgtccaag
caggacgcgcaggctcccgaacagcatgcgcagagtttgtcttcggcaggtcaagcgagt
gaagcaggagagtacacaaatagcacccgagagggttcagcgcgctggctggaaagtgaa
agcagctacgcgcagcaagatttgtggaacttcatcaaagacgagctgaagatgaaggtt
ccggagaattcccggatccgtgaacaaaaacagaaatacttaaaaaataagagctatctc
cacgatgtaacattacgggcagagccgtacatgtacctgatagtcgagcagattaagaaa
cgtaagatgccgatggaactggtactgctacccatagtggagagcgcttttgacccacac
gcgacatcatccgccaatgccgcagggctatggcagattgtgccaagtacggggcgaaat
tatggcttgaagcaaaatcaatggtatgacggtcgcagagatgttgttgcctctaccaaa
gcagcgcttgatatattggaacgcttgaacaaaatgtttaacggtgactggttattgaca
gtcgcagcttataacagcggtgaaggccgagttatgcaagcgataaaagccaataaggca
aagggcaaaccgaccgatttttgggcattgtcgcttccgcgtgaaacgtcaatttatgtt
ccaaaaatgctggccttgggtgatttactcaagaacagcaaaaagtacggtataaccttg
cctgagactgacaaagaccgtgcgctggctcgcgttgatgtcgatcaacaaatagagcta
actcaggcagctgagatggcggggatgtcactgacaaagctgaaatcctttaattctggc
tacaaacgcaatgtaacggcaccggatggacatggtccccgttatattatgttaccgaaa
gcccatgctgagcagttgaaagactcattggcagatactgatattactgctgttcaacct
acaaaattggcaacgaacagtacaaaatcagcatcaagttcgcagtataaagttcgccca
ggcgataccttatctacgattgccaagcggttgaatatcaagaccagcgatttgcagagt
tggaacaacttacgtgccaagagcaccttaaaagttgggcaaaccctgcaactggcaagc
aatacaaccagcaaaagtatcacctatcaagttcgtaaaggtgattcctttgccagtatt
gccaagcgtcacggtgtaaataccgacgatgtgatgcgatggaattcggtagtcagcaaa
gctaacaatttacaaccaggcttgaaattgacgttattcgttaacgacaaatcaaccccg
gaggcgtag
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