Yersinia pseudotuberculosis 1: BZ23_2848
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Entry
BZ23_2848 CDS
T03679
Name
(GenBank) outer membrane autotransporter barrel domain protein
Organism
ypc
Yersinia pseudotuberculosis 1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
AC_1
Pertactin
Motif
Other DBs
NCBI-ProteinID:
AJJ71259
LinkDB
All DBs
Position
complement(3218013..3221798)
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AA seq
1261 aa
AA seq
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MFMPFREFISSHVGRHPLFNRAPVAVINPITLAIIVAFSTLALPQTARASCNNSGGSTYI
CEGENNAGIILSGTDITVETQLGFGIIEPGDIDPALSLIGSGAISYLDTNSSALDTAGAY
SLSIQNDTSMIGQSTSTNVQANGSIGSGIYISSQSRDNSTIQVDLSGMLSSGLNGTPALS
IDSLADNDSTIILNIHAISGIAGIQSDNNSRYGTAITNVDIANDINVEYSGASIQNYSNS
GTSILNLNSKSISTDFDALDINNSNYSGEVMTDINIDGDISSANSQAARIYNHTNSGLSS
LRFRANNVTGEYAGLYIDNSSQNGAVTDIILTGDLTATSGSALYANTYSEEGNVETAIKL
NNVYSLYDALNIYGYNQTGNTLFDLDVSGTVTSENGTGIKVMGTTFEGNSTILINVNNIT
SSSQSLDINNYNSSGSALSAITATGHLAAEWGQGVTFQTYSSLGDATTLIHVNDITSMGN
GIYSLTEASRGTVTTDVTVTGQINVSDGEGITLNTQTIDGNTLVNIDVNNIASEYDAIHL
YNNNNTTGVDNGTGVDNGTSTIDLITRGALVSQQGYGINLETNTADTYVTVGGLVHGGNG
SAIGIHRLDNIQTSATLELQSGYALEGATQSLVFTGNYVDINDAALDLANSHLVLGGTGD
AVFDLTRIDNREEAILDGDPNRITGFGTLTKTNSSIWTLTGSNMADGDANAFLSANIAGG
ILVLDNATLGLTPDAGALTGATVNRLSAADIAADPTRVATETGALTLAEGGALSSLGDSV
LSGNLISAGGILLSNHYTGGNGAATDDRLTVTGTYFGENNGSGEGAWLALDTVLGDDDSA
TDRLVINGDATGTTSVRVNNAGGLGDKTLNGINLITVDGLAQDDTFLLAGDYVTTDGYQA
VVAGAYAYTLQADGEAATAGRNWYLSSELMLTEGVRYQVGVPLYEQYPQVLAALNTLPTL
QQRVGNRYGAPGALADLNFDDNQWAWGRIEGSHQVTDPARSTSGSQREIDVWKLQTGIDV
PLYQSQGGSLLTGGVNFTYGKAKADIHSFFGDGRINSTGYGLGTSLTWYGNNGVYVDGQL
QTMWFDSDLSSRTAGHAVASGNNGRGYTSAIEAGKGYALGNGLSLTPQMQVTYSRVDFDT
FRDPFDSEVSLQEGDSLRGRIGVSLDKETTWSAKDGTTRRSHIYSHLDLHNEFLNGSKVQ
VSGVEFATRDERQSVGLGAGGTYEWQNGRYAVYGNVNLLGATRNISDNYAVGGTIGARVS
W
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgtttatgccattcagagaatttatttctagccatgtcgggcgtcaccccctcttcaac
cgcgctcctgtcgccgtgattaatcccatcacattggcgattattgttgcgttctccacc
cttgccttaccacaaaccgcacgggcgtcgtgcaacaattcgggggggagtacctatatc
tgtgaaggtgaaaataacgccgggatcatcctaagtggaacggatatcacggttgagacc
cagctcggttttggcatcatagagcctggagatatagatcctgcgctctcattaatcggc
tctggtgccatcagctaccttgataccaacagttctgcgcttgataccgctggtgcctat
tctttgtctatccagaatgatacgtcgatgattgggcaatcgacatccactaacgttcag
gccaacggttcaattggcagtggtatctatattagcagccagagtcgcgacaactcgacc
atacaggtagacctctccggcatgttatccagcggcctgaatggcactcctgccctttca
atcgactcattggcagacaatgattcaactatcattctgaacatccatgctatttcaggt
attgcgggtatccaaagcgataataattcacggtacggaacggccatcaccaatgttgat
attgccaacgatatcaacgtcgaatattcaggagcctcgatccaaaattattccaatagt
ggcaccagcatccttaatttaaattcaaagagtatcagtacagacttcgacgccttggat
attaataatagcaattattcaggggaggtgatgaccgatatcaatatcgatggcgatatc
agttcagccaatagtcaagctgccaggatttacaatcataccaatagcggtctttcgagc
cttagatttcgcgcaaataatgtcacgggtgaatatgctggcctttatatcgataatagc
agccagaatggcgctgtaaccgatattatattgacgggtgatcttacggctacttcagga
tctgctctgtatgccaatacctactcggaggaggggaacgtcgagaccgctatcaagttg
aataacgtttattctctgtatgacgcactcaatatttacggctataaccaaactggaaat
acactgtttgaccttgatgtctcaggcacggttacttcagaaaatggtaccgggattaaa
gtgatgggaacgacttttgaaggcaattccactatactcatcaatgtgaataacattact
tccagcagtcaatcgcttgatatcaacaattacaattcttcgggttcagctctttctgcc
attactgcaaccgggcatctcgctgcggaatggggacaaggggtaacgttccaaacctat
tcctctctgggggatgctaccacgctcatccatgtcaatgacattacttcaatggggaat
gggatatatagccttactgaggctagccggggtacagtaaccaccgacgtcaccgtgacg
ggccagattaacgtcagtgatggggagggtataacccttaatacgcagaccattgacggc
aataccctggtcaacattgacgtcaataatatcgccagtgaatacgatgctatccacctc
tataacaataacaacaccacaggcgtggataatggcacaggcgtagacaacggcacatcg
accattgatctgatcacccggggcgcgctggtttcgcagcagggctacgggattaatctt
gaaaccaataccgcagacacctatgtcactgtgggcggcttggtgcacggcggcaacggc
tccgcaattggcattcatcggcttgataacattcaaacatcagccacgttagagctgcaa
tctggctatgcccttgaaggggcgacacagtcactggtatttactggcaattacgtggat
atcaatgatgccgcgctggatctggcaaacagccatctggtgctgggcggaacaggagat
gctgttttcgatctcacgcgtattgataaccgtgaagaggccattctggatggcgacccg
aaccggatcaccggtttcggcaccctgaccaaaaccaacagcagcatctggacattaacc
ggatccaatatggccgacggtgacgccaatgccttcctgtcggccaatatcgccgggggg
attttggtgctggataacgccacgctgggcctgacacctgacgctggggcactgactgga
gccacagtaaaccgcctcagtgctgccgatatcgccgctgacccgacgcgggtggctacc
gaaaccggtgcattaaccctggctgaaggcggcgcgctgtcctcgctcggtgactcggtt
ctgagcggcaacctcatcagcgctggcgggatcctgctgtcaaaccactataccggcggc
aatggtgccgctaccgatgatcggctgaccgtgaccgggacttattttggtgaaaataac
ggttccggtgaaggggcctggctggcactcgatacggtgctgggggatgacgattctgcc
accgaccggttagtgatcaacggcgatgccaccggcaccacctcggtccgggtgaacaat
gcgggcggtctgggcgataaaaccctcaatggcatcaatctgatcaccgtggacggtctg
gcgcaggatgacaccttcctgctggccggggattatgtcaccacggatggctatcaggcg
gtggtggccggggcgtatgcctacaccttacaggccgacggggaagccgctaccgcaggc
cgcaactggtatctctcgtcagaactgatgctaaccgagggggtacgctatcaggtgggg
gtgccgctgtatgaacaatatccgcaggtgctggccgccctgaacactctgccgacgctg
caacagcgtgtcggtaaccgttacggggcaccgggtgcgctggcagacctgaactttgac
gataatcaatgggcctggggccgtattgaagggagccaccaggtcaccgacccggcccgc
tccaccagcggttcacagcgtgagattgatgtgtggaagttgcagaccggcattgatgtg
ccgttgtatcagagccagggcggttcactgctgaccggcggggtgaacttcacctacgga
aaagccaaagcggatatccactcattctttggtgatggccgcatcaacagcacaggttac
ggtcttggcaccagcctgacctggtatggcaataacggcgtgtatgtggatggccagttg
cagacgatgtggtttgacagcgacctgagctcccgtaccgcagggcatgcagtggccagc
ggtaacaatggtcgcgggtatacctcggcgatagaagccggtaaaggttacgcactgggt
aacgggttgtcactgaccccgcagatgcaggtgacctactcgcgggtcgatttcgatacc
ttccgcgatccgtttgatagcgaagtctcgctgcaagagggtgacagcctgcggggccgc
attggtgtctcactggataaggaaacgacctggagcgcgaaagacggcaccacccgccgc
tcacacatttacagtcatctcgatctgcacaatgagttccttaacggcagcaaagtacag
gtctcaggggtggagttcgccacccgggatgagcgtcagtcggtggggttaggcgcgggt
ggcacctatgaatggcagaatggtcgctacgcggtttacggcaatgtcaatctgctgggg
gctacacggaatatcagtgacaactatgccgtcggcggcacgataggtgcacgggtgagc
tggtaa
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