Yersinia pseudotuberculosis 1: BZ23_315
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Entry
BZ23_315 CDS
T03679
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ypc
Yersinia pseudotuberculosis 1
Pathway
ypc02024
Quorum sensing
ypc03060
Protein export
ypc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ypc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
BZ23_315 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
BZ23_315 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BZ23_315 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ypc02044
]
BZ23_315 (ffh)
Enzymes [BR:
ypc01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
BZ23_315 (ffh)
Secretion system [BR:
ypc02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
BZ23_315 (ffh)
Eukaryotic Sec-SRP protein
BZ23_315 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
cobW
AAA_30
AAA_31
AAA_24
KTI12
AAA_33
APS_kinase
YqeC
VirC1
AAA_14
T2SSE
Fe-ADH_2
AAA_16
AAA_19
DUF5407
ABC_tran
TsaE
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
AJJ73162
LinkDB
All DBs
Position
382915..384276
Genome browser
AA seq
453 aa
AA seq
DB search
MFENLTDRLSRTLRNISGRGRLTEENIKETLREVRMALLEADVALPVVRDFINRVKERAV
GHEVNKSLTPGQEFVKIVKNELISAMGEVNNELNLAAQPPAVVLMAGLQGAGKTTSVAKL
GKFLKEKQKKKVLVVSADVYRPAAIKQLETLAQGVGIDFFPSDAQEKPIDIVNRALQQAK
LKFYDVLIVDTAGRLHVDEAMMDEIKQVHAAIKPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKSDALEPFHPDRIASRILGMGDV
LSLIEDIESKVDRVQAEKLATKLKKGDGFDLNDFLDQLKQMRNMGGMASMLSKMPGAGQL
PENVKSQMDDKVTVRMEAIINSMTLKERAKPEIIKGSRKRRIATGSGVQVQDVNRLLKQF
DEMQRMMKKMKNGGLAKMMRGMKGMMPPGFPGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaacttaactgatcgattgtcgcgcacactgcgcaatatcagcggccgtggc
cggctgacagaagaaaatattaaagaaacgctacgtgaagtgcgcatggcattacttgaa
gctgacgtcgctctgcccgttgttcgtgactttataaaccgagtaaaagagcgggctgtt
gggcatgaagttaataaaagtctgacgccaggccaagaattcgtcaaaatagttaaaaat
gaattgatcagcgccatgggcgaggtcaataacgaactgaatctggctgcacaaccgcca
gcagttgtgttaatggctggcttgcaaggtgcgggtaagaccaccagtgtagcgaaactg
gggaaatttcttaaagaaaaacagaagaaaaaagtgctggtcgtgtctgctgacgtttat
cgccctgcggcgatcaaacagttggaaaccctggctcagggtgttggcattgatttcttc
ccgtctgatgcacaggaaaaaccgattgatattgtgaatcgtgccctgcaacaggcaaag
cttaaattttatgatgttctgattgtcgataccgcaggtcgcttacacgttgatgaagcg
atgatggacgaaatcaaacaggttcatgcggcgattaagcctgttgaaaccttgtttgtc
gtcgatgcgatgaccggtcaggatgcggcgaatactgccaaagcattcaacgaagcactg
ccactcaccggtgtcgtgctgactaaagtggatggcgatgcgcgcggtggtgcggcttta
tctatccgccatatcaccggtaaacctattaaattccttggcgtcggtgagaaatctgat
gcactggaaccgttccatccagaccgaatagcctcacgtatcttgggtatgggcgatgtg
ctgtcgctgattgaagatatcgaaagcaaagttgaccgtgtgcaagcggagaaactggca
acaaaactgaaaaaaggcgatggtttcgatctcaatgacttcctcgaccagttgaagcag
atgcgcaacatgggggggatggccagtatgttgagtaaaatgccaggggcaggtcagttg
ccagaaaacgtaaaatcgcaaatggatgataaagtcacggtgcggatggaggcgatcatc
aattctatgacgctgaaagagcgcgctaaacctgaaattatcaaaggttcacgtaagcgc
cgtatcgcaaccggttctggtgtgcaggtacaggatgttaaccgtttgctgaaacagttt
gatgaaatgcagcgcatgatgaagaaaatgaaaaacggcggtttggccaaaatgatgcgt
ggcatgaaaggtatgatgccacccgggttcccaggtcgctaa
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