Yersinia pseudotuberculosis 1: BZ23_3231
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Entry
BZ23_3231 CDS
T03679
Name
(GenBank) RHS repeat-associated core domain protein
Organism
ypc
Yersinia pseudotuberculosis 1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Tox-SHH
DUF6531
RHS
PAAR_motif
Motif
Other DBs
NCBI-ProteinID:
AJJ71080
LinkDB
All DBs
Position
complement(3683582..3688330)
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AA seq
1582 aa
AA seq
DB search
MAGDFLAAKEADTLAHTSIWADLVSGIVKGAIYTAIGLAAVAATAATGGAALAVGLAAGV
AGGFILGDAIDAVSDGIGELLGGTSLDATIVTGSENVHTKSKPAARAAGSIPHDRLYALI
EDERQNPPKNKALAIAEGVAQKAFMLSGPGMAMAAGSVVKSLFSENKAAPVPPSPPPGNE
PQKGFFEGVWEGIVAPVAAAKDPLATPQDDDKIACTKWHAFGGPLYLAEGSKKVLINSQP
ASRNGDRSTCEAVIDHTHGSPRVRIGGGSVVVRDIKSGKNPVMDLLGQVIGSAGVGLLAA
GARTLLTGGIRKCLSTVGCTLVMETVGAGLGAVVGGAIGQAVSAVANPVHAATGAKVLSG
EEDRDFVLQGQYPLYWQRIYNSRNAHDSVLGRGWSLAFDVAVRLEPSLRFPGEDEVIYTD
RTGRDLSLGIMALGSAFYYVDEGFRMYRSLNNIFLLETPEGDYELFEADPHGINRLRLEK
TLDRHENSLTYRYTPDGQLSHIYDDSHAVSVRLRYHPDHPHRLQQVSQISDEQHDRLLVE
YHYNPAGELVAVQDADGRITRRFAYDPDHHLMTQHQFATGLQAHYRWQWLTVPDALRDEG
DPVQQGYVAEHWLMAGEQCLEAYQLEYDLAQQILRVNQRGVGTSVRYWNNQHQITAHTDV
YGHRWQFEWNDLRQLCAATDPQGGVYRFEYDARGNLSASVDPEDEKFLTGWDEDFALPCS
QILPNGGTWYYQYSARGDLIATIDPAEQVTRYDYDTQGNLIRQVDACGNESHYAYNPRGQ
LIRQTDCSGYMTRVAYDEWGQLQSLTDASGAMTHYHFSATGLLEKQILPDGRAPQFQYDP
AGQLAKIVSPAGDITTFARNARGQVTERGDGRQQRVRFQYDTLGHLVCLLNEKGEAYRFE
YDALHRLTAEYDLSGQCKQYQYNASGAVIALTHYPDAAIPALQTSPLFTAFERDQTGRLR
ARMMHDCRTEYRYDKSGLTVTRFTRAEWAQAQIEQREPVVLDTLAFSYNTLGQLTEERNL
GGDYRHHYDPVGNLLKTVLPDGRALRHLYYGSGHLQQTNLVDGEDIQVLAEYERDRLHRE
VRRTQGALQQQTEYDASGRIVANITRLGVRASVFAPVIDKRYGYDANDNLIERVVNYGHS
DRPFHYGARDAEQYHYDQAGQITAKVQGHDSRDYLYDAAANLLDRTSPVANNNRVTQFAG
YRYQYDGFGRMVERTHERKRLRQFFEYNSDHRVVRVRFDNHPEFTRVEYGYDALGRRTEK
VLHRQGHEGAVPEPEVIRFFWNGMTLCGECSGNKPKNAVLYTYRAGSYAPLARVDTFHYE
EADTGKVHHSTEVFYYHNHLNGMPEELTDETGAIVWRGHASLWGNTQHEENKQYVVVAQN
LKLQGQYLDRETGLHYNTFRYYDPVMGRFTQPDPIGLAGGINLYAYAPNPLGWVDPLGLS
ACNSPNGYKAGDVDPHGNLSPGANRASGHTNSKADDFVQSHHPIQDAWAKRRIAGYQRNS
APATLLKSASGSPHAGISAAQRTRRALPSGWDTTLKQEFNISYREMLNTGVPASQARKSL
GDAYKYFDRLRGSNTGNPFFDI
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggattttctggcagcaaaagaagcggacaccttggcgcatacctccatttgg
gccgatttagtgagcgggattgtgaaaggggcgatttacaccgctatcggtctcgccgca
gtggcggccacggcggccaccgggggggctgcgctggctgtcgggctggcggctggcgtg
gcgggcggctttattttaggggacgcgattgatgctgtttctgatggcatcggtgaactg
ctgggagggacgtcactggatgcgaccattgtcaccgggtcggagaatgtccataccaaa
agcaaacccgccgcccgtgccgccgggagtattccccatgaccgcctctacgcattaatc
gaagatgagcggcaaaatccgccgaaaaataaagcgctggcgattgcggaaggcgtggcc
caaaaagcctttatgctcagtgggccgggtatggcgatggccgccggatctgtggtgaaa
tctcttttcagtgaaaataaagcggcccctgttcccccgtccccgcctcccggcaatgag
ccccaaaaagggttctttgaaggggtgtgggagggcattgtggccccggtagccgccgcg
aaagatccgttggcgaccccgcaggacgatgacaaaattgcctgtaccaaatggcatgcc
ttcggggggccactctacctggcggaaggctcgaagaaagtcctgatcaacagccaaccc
gccagtcgcaatggggatcgcagtacctgtgaagcggtgatcgaccatacgcatggcagc
ccccgggtgcgtattggcggtggcagcgtggtggtgcgggatatcaaaagcggtaaaaac
ccggtgatggatctgctcgggcaggtgataggctctgccggtgtggggctgctggctgct
ggcgcgcggacgttgcttaccggagggatccgcaagtgcctgagtacggtgggctgtacc
ctggtgatggaaacggtcggtgcggggttgggcgcggtggtgggcggtgccatcgggcag
gcggtgtcagcggttgccaatccggtgcatgcggcgaccggagccaaagtgttatccggc
gaagaagatcgcgattttgtgttacagggccaataccccttgtactggcagcggatctat
aacagccgcaatgcacatgacagtgtgttggggcgcggctggtcattagcttttgatgtc
gctgtgcgccttgaaccctccctgcgcttccccggtgaagatgaggtgatttacaccgat
cgtaccgggcgggatctgtcgctggggatcatggcgttgggcagtgccttctattatgtc
gatgaaggctttcgcatgtaccgcagcctgaacaatatttttctgcttgaaaccccggaa
ggtgattacgagctgtttgaagcggatccccacggtattaaccggttacggctggagaaa
accctggatcgccatgaaaacagcctgacctaccggtatacccctgacgggcaactgagc
catatctatgatgacagccacgcggtatccgtccggctgcgttatcacccggatcatccg
caccggttacagcaggtcagccagatcagcgatgagcaacatgatcgcctgttggtggaa
tatcattacaatcccgccggggaactggtggcggtgcaggatgccgacgggcgtatcacc
cgccgctttgcctatgatccagaccaccatctgatgacgcagcaccagtttgcgacgggg
ttacaggcccattatcgctggcagtggctgacggtgccggacgcgctgcgtgacgagggc
gatccggtgcagcagggatatgtcgctgagcactggctgatggcgggcgagcagtgtctg
gaggcatatcaactggagtacgatctggcgcagcagatcttacgggttaaccagcgcggg
gtcggtaccagtgtgcgttactggaacaaccaacatcaaatcaccgcccacacggatgtt
tacggccaccgctggcagtttgagtggaacgacctgcgtcagttgtgcgcggcgaccgat
ccgcagggtggagtttaccgttttgagtatgacgcgcgggggaatctcagtgccagcgtg
gatccggaggatgaaaaattcctgaccgggtgggatgaggattttgcccttccgtgctca
cagattttacccaacggcggcacctggtattaccagtacagtgcgcggggcgatctgatc
gccacgatcgatcccgccgaacaggtcacccgctatgattacgatacacagggcaacctg
atccggcaggtggatgcctgcggcaatgagagccactatgcgtataacccgcgcgggcag
ttgatccgtcagactgactgttccggttatatgacgcgggtggcgtatgacgaatggggc
cagttgcagtccctcacggacgccagcggggcgatgacccactaccatttctcggccacc
gggttactggagaaacagatcctgccggatggccgtgcgccgcagttccagtacgatccc
gccgggcaactggcaaagatcgtcagtccggcgggggatatcaccacctttgcccgtaat
gcgcgcgggcaggtcaccgagcgcggggatggccgtcagcaacgtgtgcgttttcaatac
gatacgctgggccaccttgtctgcctgctgaatgagaagggggaagcctaccggttcgag
tacgatgcgctgcaccgtctgacagcggaatatgacctgagcgggcagtgcaaacagtac
cagtataatgcatcaggcgcggtgatcgcactgacccattaccccgatgcggcgataccc
gcattacagacgtcgcctctgttcaccgccttcgagcgtgaccagacgggccggttgcgg
gccagaatgatgcatgactgccggacggagtaccggtacgacaagagcggccttacggtc
acccgttttacccgtgccgaatgggcacaggcccaaattgagcaacgggagccggtggtc
ctggatacgctggcgtttagctataacacgctggggcagctcacggaggagcgcaatctg
gggggcgattaccggcatcactatgatccggtcggcaatttgctgaagacggtactgccg
gacgggcgtgctctgcggcacctctactacgggagcgggcatttacagcagaccaatctg
gtggacggtgaggatattcaggtgctggcggagtatgagcgcgacaggctgcaccgggag
gtgcgccgtactcagggggcgttgcagcagcagacggaatacgatgccagtgggcgcatt
gtcgccaatatcacccgtttgggcgtgcgggccagcgtctttgcgccggttatcgataaa
cgttatggctatgatgcgaatgataacctgatcgaacgggtggtgaactacggtcacagc
gaccggccgttccactacggggcccgggacgcggagcagtaccattatgatcaggcgggc
cagataacggccaaagtgcagggtcacgacagccgggattatctgtacgatgcggcggcg
aatttactggatcgtacctcgccggtggcgaacaataaccgggtgacacaatttgcgggg
taccgttaccagtacgatggttttgggcggatggtggagcggacccatgagcgtaagcgg
ctccggcagttttttgagtacaacagtgatcaccgtgtggttcgggtgcggtttgataac
cacccggagtttacacgggtggaatacggctatgatgcgctgggacggcggacagaaaaa
gtgttgcaccgtcagggtcacgagggcgcagtgccggagccggaggtgatccgcttcttc
tggaacgggatgaccctgtgcggagaatgcagcggaaataaacccaagaacgcggttctg
tatacctaccgggcggggagttatgcgccgctggcgcgggtggataccttccattatgaa
gaggcggatacgggcaaagtccatcattcgacggaggtattttactaccacaaccacctg
aacgggatgccggaagagctgaccgatgaaacgggcgcgatagtgtggcggggccatgcc
agcctgtggggcaatacgcaacatgaggaaaataaacagtatgttgtggtggcgcagaac
ctgaagcttcagggccaataccttgacagagagacggggttgcactacaacacattcagg
tattatgacccggtgatgggtcgcttcacccaacccgacccaatagggctggcggggggg
ataaatctttatgcttatgcgccgaatccgctggggtgggttgatccgttagggttgagt
gcatgtaactcaccaaatggttataaagctggtgatgtagatccccatggtaatttatct
ccaggagctaatcgtgcttcaggacatacgaatagcaaagctgatgatttcgttcaaagt
catcatcctattcaggatgcatgggccaagagaagaattgctgggtatcaacgaaactct
gcgccagcaacattattgaaatcagcatctggcagccctcacgctggaatcagcgcggct
caacgaactcgacgtgctttacctagtggttgggatactacgcttaagcaagagttcaat
attagctatagagaaatgcttaatactggcgtcccagcaagtcaggctcggaaatcactt
ggtgatgcatataagtattttgatagactcagaggaagtaatacaggcaatccgttcttt
gatatttag
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