Yersinia pestis D106004: YPD4_0096
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Entry
YPD4_0096 CDS
T01832
Symbol
priA
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ypd
Yersinia pestis D106004
Pathway
ypd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ypd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
YPD4_0096 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypd03400
]
YPD4_0096 (priA)
Enzymes [BR:
ypd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
YPD4_0096 (priA)
DNA repair and recombination proteins [BR:
ypd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
YPD4_0096 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHD_PriA
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_22
AAA_19
TrwB_AAD_bind
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ACY57005
LinkDB
All DBs
Position
complement(116517..118715)
Genome browser
AA seq
732 aa
AA seq
DB search
MSVVQVALPVPLARTFDYRLDSAMACPVVGARVSVPFGKRKAIGIVVGLSDTSTFPLEQL
KTIDAILDNHSLFPPSLWRILCWATEYYHYPIGEVLFHALPILLRQGRPAQSAPLWQWFV
TEQGRATPPESLKRAPKQQQALAALLQKPVYRHQVNEMALTESALQALRSKGLIDLRAQE
ATTTDWRHSFSVLGERLRLNTEQATAVGAIRSEDNQFAAWLLAGVTGSGKTEVYLSVLEN
ILAQGRQALILVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSVWLRARSGEAAIV
IGTRSALFTPFSRLGVIIIDEEHDSSYKQQEGWRYHARDLAVFRAREEGIPIVMGTATPA
LETLHNVQMGKYRQLTLTKRAGSAKPAAQHLLDLKGLPLKVGLSQPLLKQMKTHLQAGNQ
VILFLNRRGYAPALLCHECGWIAECQRCDHYYTLHQNHRQLRCHHCDSQRPVPQQCPKCG
STHLVSVGVGTEQLENELAPLFPETPITRIDRDTTSRKGSLEQYLADVHQGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVILQTHH
PEHPLLQILLQQGYDAFAKQALEERKSVFLPPYTSHIIVRSEDHDNQQSALFLQQLRNLL
EASPLKDEALWIMGPVPALQAKRGGRFRWQLLLQHPSRQLLQRLIKTSQPLISTLPQARK
VKWTIDVDPIDS
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttgttcaagtggcattacccgtaccgctggcccgtaccttcgattaccgctta
gacagtgccatggcctgccctgtcgtaggggcccgtgtcagtgtgccattcggtaaacgc
aaagcgattggtatcgtcgtgggtctcagtgataccagcacctttccgcttgaacaactc
aaaaccattgatgccattttagataatcacagcttattcccccctagcctgtggcgcatt
ctctgctgggcaaccgagtattaccattatccgataggtgaagtgctgtttcatgcactg
ccgatcttgttacgtcaggggagacccgcccaatcagcgcccttatggcaatggtttgtc
accgagcaaggccgcgctacaccaccagaaagcttaaaacgcgcgcccaagcagcagcaa
gcgcttgctgcattattgcagaaaccggtttatcgccatcaggttaatgaaatggcatta
actgaaagtgcattacaggcattacgcagtaaagggttgattgatctacgggcgcaggaa
gccacaaccaccgactggcgtcacagtttttcggtactgggggaacgcctacggcttaat
actgaacaggccaccgccgtcggggctattcgtagcgaagataaccaatttgccgcttgg
ttgctggcaggtgttacgggttcaggtaaaaccgaagtttacctgagcgtgctggaaaac
attctagcgcagggccgtcaggccctaattctggtgcctgaaattggcctgaccccacaa
accatcgcccgttttcgtgaacggtttaacgcaccggttgaggttctccattcaggcttg
aacgacagtgagcgcttatccgtctggttgcgggcacgtagtggtgaggcggcgattgtg
attgggacccgctcagccttgtttacgccgttttcacgccttggcgtcatcattattgat
gaagagcatgacagctcttataaacagcaggaaggttggcgttatcatgccagggattta
gcggtatttcgcgcccgcgaagagggtattcctatcgtcatggggacggcaactcccgcg
cttgagactctgcataacgtccaaatgggtaaataccgccagctaaccctgaccaaacgc
gcagggagtgccaaacctgcggcacaacatttgctggatctaaaaggcctgccattgaaa
gtcggcctctctcaacccctgctgaaacagatgaaaacgcacctgcaagcgggtaatcag
gtgattttattcctcaaccgccgtggctatgcacctgccctgttgtgtcacgaatgtggc
tggattgccgaatgtcagcgctgcgaccactattacacgctgcatcaaaaccaccgtcag
ttacgttgccaccactgtgacagccaacggcctgtgcctcagcaatgccctaaatgcgga
tcgactcatctggtctccgttggcgtggggacggaacagttggaaaatgaactggcaccg
ttatttcctgagacaccaataacccgcattgaccgcgatacgaccagccgtaaaggatcg
ctggagcaatatctggcggatgttcaccaaggtggtgcacgcattttgattggtacacaa
atgttggccaaagggcaccacttccctgacgtcaccttggtggcgctactggatgttgat
ggcgcgctgttttcagcggatttccgctcagccgagcgctttgcccagctttatacgcag
gtctcaggccgggccgggcgggcaggcaagcaaggggaagtgattttacaaactcaccac
cccgagcatcccctgctgcaaattctgttacagcagggctacgatgcgtttgccaaacaa
gcgctagaagagcgtaaaagcgtgtttttaccgccctataccagccatattatcgtgcgc
agtgaagatcacgataaccaacaatcagccctcttcctgcaacaattacgtaatttgctg
gaggccagccccctcaaagatgaggcgttatggattatggggccagttccggcgttacaa
gccaaacggggtgggcgctttcgctggcagttattgctacaacatccctcacggcaactg
ctgcaacggctgattaaaacctctcagccattaatcagtaccttacctcaggcacgcaaa
gtgaaatggacaatagatgtcgatcctatcgatagttga
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