Yersinia pestis D106004: YPD4_0317
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Entry
YPD4_0317 CDS
T01832
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ypd
Yersinia pestis D106004
Pathway
ypd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ypd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
YPD4_0317 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ypd03019
]
YPD4_0317 (orn)
03009 Ribosome biogenesis [BR:
ypd03009
]
YPD4_0317 (orn)
Messenger RNA biogenesis [BR:
ypd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
YPD4_0317 (orn)
Ribosome biogenesis [BR:
ypd03009
]
Eukaryotic type
Pre-60S particles
RNases
YPD4_0317 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ACY57226
LinkDB
All DBs
Position
374008..374553
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AA seq
181 aa
AA seq
DB search
MAENQNNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVLAVHQSAEQLGLMDE
WNVRTHTGSGLVERVKASPFNDRDAELQTIEFLKQWVPAGVSPICGNSVGQDRRFLFRYM
PELEAYFHYRYVDVSTLKELARRWKPEILAGFKKQNTHQALDDIRESVAELAYYREHFIQ
S
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaatcaaaataatctgatctggatcgatctggaaatgaccggtctcgatcca
gagcgggatcgcattatcgaaatcgctaccttggtcactgatgcgaatcttaatattctg
gcagaaggacctgttctggcagtccatcaatctgctgaacagcttgggctaatggatgag
tggaatgttcgtacccatactggtagtggcttggttgagcgggtgaaagccagccccttt
aatgaccgtgatgctgaattacaaactatcgaattcctaaaacagtgggtccccgcgggg
gtttcacccatttgcggtaacagtgtaggtcaggaccgccgtttcctgttccgctacatg
ccagagcttgaagcgtatttccattaccgctatgtagatgtcagtacattgaaagagtta
gcgcgtcgctggaaacctgaaattctggctggttttaaaaagcaaaatacccatcaggca
ttggatgacattcgtgagtcagtcgccgagcttgcttactatcgtgagcattttattcaa
tcttaa
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