Yersinia pestis D106004: YPD4_0732
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Entry
YPD4_0732 CDS
T01832
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
ypd
Yersinia pestis D106004
Pathway
ypd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ypd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YPD4_0732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypd03400
]
YPD4_0732
Enzymes [BR:
ypd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
YPD4_0732
DNA repair and recombination proteins [BR:
ypd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
YPD4_0732
Prokaryotic type
YPD4_0732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
HHH_8
Motif
Other DBs
NCBI-ProteinID:
ACY57641
LinkDB
All DBs
Position
complement(946311..947429)
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AA seq
372 aa
AA seq
DB search
MMQAQQFAHVVLDWYQHFGRKTLPWQLDKTPYQVWLSEVMLQQTQVATVIPYFQRFMLRF
PDIQALAAAPLDDVLHLWTGLGYYARARNLHKAAQMVVEHHQGEFPTTFDQILALPGIGR
STAGAILSLSLGQHFPILDGNVKRVLARCYAVDGWPGKKEVEGRLWQISEDVTPANGVGQ
FNQAMMDLGAMVCTRSKPKCELCPLNIGCMAYANHSWARYPGKKPKQTLPEKTAWFLLMQ
NGSQVWLEQRPPVGLWGGLFCFPQFAEQEELIHWLQKQGIPANETQQLTAFRHTFSHFHL
DIVPIWLNTASVRGCMDDGAGLWYNLAQPPSVGLAAPVERLLHQLLKDPLAKDELTQQQL
TKQSPTQPALFD
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaagcgcaacaattcgcgcacgtggtacttgattggtaccaacactttggccgc
aaaaccctgccatggcagttggataagaccccctatcaagtatggctgtcagaagtgatg
ttgcaacaaactcaggttgcgaccgtcatcccctattttcaacgttttatgctgcgcttc
cctgatattcaggcactggcggctgcgccgttggatgatgtactgcatttatggaccggt
ttgggttactacgcccgtgccagaaacctgcataaagcggcccaaatggtcgtggaacac
catcaaggggagtttcccacaacatttgaccagatactggcattgccgggtatcgggcgc
tcaactgccggggctattttatcgctgtctttaggccagcattttcctattttggatggc
aacgtcaaacgggtgctggcccgttgctatgccgttgacggctggccgggaaaaaaagag
gtcgaaggccgcctgtggcaaatcagcgaagatgtcacacccgccaacggggtgggccag
tttaatcaggcaatgatggatttaggcgcgatggtgtgtactcgctctaaacctaaatgt
gaactttgcccattgaatatcggctgtatggcgtacgctaaccacagttgggcgcgctat
ccgggcaaaaaacctaaacagacgttgccggaaaaaaccgcctggttcttattaatgcaa
aatggatcgcaagtgtggctcgaacagcgccccccagtcggcttatggggcggcttattc
tgtttcccacaatttgctgaacaagaagaactcattcactggctgcaaaaacagggtatt
cccgccaatgaaacccagcagttaaccgcgtttcgccatacgtttagtcatttccatctg
gatatagtccctatatggctaaatacggcctcagtccgaggatgcatggatgatggcgca
ggtctctggtataacttagcccagccaccttcggtagggttagctgctccggttgagcgt
ttattgcatcagttattaaaagatccgttggcaaaagatgagttaacgcaacaacaactc
acaaagcaatcgcctacccaaccagctttatttgactag
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