Yersinia pestis D106004: YPD4_0966
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Entry
YPD4_0966 CDS
T01832
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase catalytic subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ypd
Yersinia pestis D106004
Pathway
ypd00020
Citrate cycle (TCA cycle)
ypd00190
Oxidative phosphorylation
ypd00650
Butanoate metabolism
ypd00720
Other carbon fixation pathways
ypd01100
Metabolic pathways
ypd01110
Biosynthesis of secondary metabolites
ypd01120
Microbial metabolism in diverse environments
ypd01200
Carbon metabolism
Module
ypd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ypd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ypd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
YPD4_0966 (sdhA)
00650 Butanoate metabolism
YPD4_0966 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
YPD4_0966 (sdhA)
00720 Other carbon fixation pathways
YPD4_0966 (sdhA)
Enzymes [BR:
ypd01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
YPD4_0966 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
HI0933_like
Pyr_redox_2
DAO
Thi4
FAD_oxidored
FAD_binding_3
BEX
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
ACY57875
LinkDB
All DBs
Position
1245409..1247175
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AA seq
588 aa
AA seq
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MNLPIREFDAVVVGAGGAGMRAALQISQMGLSCALISKVFPTRSHTVSAQGGITVALGNT
HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAVLELEHMGLPFSRLEDGSIYQRPFG
GQSLNFGGGQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAFVGC
TAINIETGEVVYFKARATILATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCDGPWGPHAKLKLDHLGKDVLESRLPGILELSRTFAHVDPIKEPIPVIPTCHYMMGGI
PTKVTGQAITVNEKGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGMHLQ
ESLMEQGASRDASESDIEASLARMNRWNNTRSGEDPVEIRKALQACMQNNFSVFREGDAM
AKGLEELKTIRERLQNARLDDTSSEFNTQRIECLELDNLMETAFSTAVSANFRTESRGAH
SRFDFPDRDDVNWLCHSLYLPGTESMTRREVNMQPKLREAFPPKVRSY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgccaatcagagagtttgatgcagttgttgtcggtgcaggtggtgccggtatg
cgtgccgccctgcaaatttcacaaatgggcctgtcttgcgccctgatatctaaagtcttc
cctacccgttcccataccgtatctgcgcagggggggattaccgttgcgctgggtaatacc
catgaagataactgggaatggcacatgtacgatacggtaaagggttccgattatatcggc
gatcaggatgccatcgaatatatgtgtaaaaccggtccggaagcggttctggaattggag
cacatgggtttacctttctcccgtttagaggatgggagcatttatcagcgtccatttggg
gggcagtcactgaactttggcggtgggcaagcggcgcgtacagcggctgcagctgaccgc
accggtcatgcgttgttacacaccctttatcagcaaaacctgaaaaaccacaccactatt
ttctctgaatggtatgcactggatttggtgaagaatcaggacggcgcttttgtcggttgt
actgctattaatattgaaaccggcgaagtcgtctatttcaaagcacgggccacaatattg
gcaactggcggtgctgggcgtatttaccaatcaacaaccaatgcgcacattaataccggt
gacggtgttggtatggccttgcgtgctggagtcccggtgcaggacatggaaatgtggcag
ttccacccgaccggtattgccggtgcgggtgtattagtgactgaaggctgccgcggtgaa
ggggggtatttactgaataaacatggtgaacgcttcatggaacgttatgccccgaacgcc
aaagatttggcgggtcgtgatgtagtggcacgttccattatgattgaaatccgtgaagga
cgtggttgtgacggtccttggggcccacatgccaaactgaaattggatcacttaggtaaa
gatgtgcttgaatcccgtctgccgggtattcttgagctgtcgcgcacctttgcacacgtt
gacccgatcaaagaaccgatcccggttatccctacttgccattatatgatggggggaatt
ccgactaaagtgacgggtcaggcgattaccgtaaatgaaaagggtgaggatgttgtgatc
cccggcttgtttgctgtaggcgaaattgcctgtgtttccgtccacggtgcgaaccgcttg
ggagggaactcattactggacttagtggtatttggtcgtgctgccggtatgcacctgcaa
gaatcattgatggagcagggcgcaagccgcgatgccagtgagtcagatatcgaagcctct
ctggctcgcatgaatcgctggaataatacccgttcaggtgaagatccagttgaaatccgt
aaagcattgcaagcctgtatgcagaacaatttctccgtgttccgcgaaggcgatgcgatg
gcaaaagggttggaagagctgaaaactatccgtgaacgtttgcaaaatgcccgtttggat
gacacttccagtgaattcaatactcagcgtattgagtgcctggagctggataacctgatg
gaaactgcgttttcaaccgctgtgtcggcaaacttccgtaccgagagccgaggtgcccat
agccgcttcgatttcccggatcgtgatgatgtgaactggctgtgccattcactgtatttg
ccaggtactgagagcatgacccgccgtgaggtaaacatgcaacctaagctacgcgaggca
ttcccgccgaaagtgcgttcttattga
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