Yersinia pestis D106004: YPD4_1238
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Entry
YPD4_1238 CDS
T01832
Symbol
msbA
Name
(GenBank) probable transport ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
ypd
Yersinia pestis D106004
Pathway
ypd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ypd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
YPD4_1238 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ypd02000
]
YPD4_1238 (msbA)
Enzymes [BR:
ypd01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
YPD4_1238 (msbA)
Transporters [BR:
ypd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
YPD4_1238 (msbA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
DEAD
Zeta_toxin
ABC_membrane_2
nSTAND3
APS_kinase
AAA_29
AAA_22
AAA_18
AAA_16
AAA_15
MMR_HSR1
AAA_25
SLFN-g3_helicase
6PF2K
SRP54
HUTI_composite_bact
DUF87
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ACY58146
LinkDB
All DBs
Position
1588600..1590348
Genome browser
AA seq
582 aa
AA seq
DB search
MMNDKDLSTWQTFRRLWPTISPYKAGLIVAAIALILNAASDTFMLSLLKPLLDDGFGNSN
SSILKWMPLAVIGLMVVRGVTGFVSSYCISWVSGKVVMHIRRRLFSHMMGMPVSFFDQQS
TGTLLSRITYDSEQVAASSSSALVTVVREGASIIGLFIMMFYYSWQLSLILIVIAPIVSI
SIRLVSKRFRNISKNMQNTMGEVTTSAEQMLKGHKEVLIFGGQKVETERFDAVSNRMRQQ
GMKLVSASSISDPIIQLIASFALALVLYAASFPSVMETLTAGTITVVFSAMIALMRPLKS
LTNVNTQFQRGMAACQTLFSILDMEQEKDEGKLEVERAKGDIEFRHVTFYYPGKDTPALN
DINIHLEAGKTVALVGRSGSGKSTIANLLTRFYDVSEGSILLDGHDLRDYRLGALRNQVA
LVSQNVHLFNDTVANNIAYARNEQYSRAEIEEAARMAYAMDFINKMEHGLDTVIGENGIM
LSGGQRQRIAIARALLRNCPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLS
TIEKADEIVVIEDGRIVERGVHAELLVQQGVYAQLNRMQFGQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgataaagatctatccacttggcagacctttcgtcgcctatggccgacgatc
tccccttataaggccggtcttatcgttgcggcgatagcattaatccttaatgcggccagt
gatacttttatgctgtcgttactgaaacccttgctagacgatgggtttggcaattcgaac
agttcaattctgaaatggatgcctttggctgttatcggcctaatggtagtgcgtggcgtg
actggttttgtctcaagctactgtatttcttgggtgtcgggtaaagttgtaatgcatatc
cgccgccgcttattcagccatatgatgggtatgcctgtttctttctttgaccaacaatcg
acgggtaccttattgtcgcgcattacttacgactctgagcaggtagctgcgtcctcctcc
agtgcgttggtgactgtggtgcgggaaggggcctctatcattggtttgttcattatgatg
ttttattacagttggcagttgtcgctgattttaatcgtcattgcacccattgtgtctatt
tcgatccgtctggtatccaaacgttttcgtaatatcagtaagaatatgcaaaatactatg
ggggaagtgaccaccagcgctgagcaaatgctcaaagggcataaagaagttttgatcttt
ggtggccagaaggttgaaaccgagcgctttgatgctgtcagtaaccgtatgcgccagcag
gggatgaaactggtttctgcctcttctatttcagatcccatcattcaattgattgcctct
tttgcattggcacttgtactttatgcggcaagttttccaagtgtaatggaaacgttgact
gccggtactatcaccgttgtattctctgcgatgattgctctgatgcgtccattgaagtcg
ctgacaaatgttaatacccagttccaacgcggtatggcagcctgtcagacgttattcagc
atattggatatggagcaggagaaagacgaaggcaagcttgaagttgaacgggcgaaaggt
gatatagaattccgccatgtgactttctattatcccggtaaggatacgcctgcgctaaat
gatatcaatatacaccttgaagcgggcaagaccgtggcattggttgggcgctcaggttca
ggtaaatccaccattgctaacttactgacccgtttctacgatgtcagtgaagggagcatt
ttgttagatgggcatgatctgagagattaccggttaggtgccttacgtaatcaagtggcg
ttggtttcacaaaatgttcacttattcaacgatactgtcgctaataatattgcttacgcc
cgtaatgaacagtacagccgtgctgaaattgaagaagccgctcgaatggcgtatgccatg
gactttatcaataagatggaacacggtttggataccgttattggcgagaacggtatcatg
ctctccggtggtcaacgtcagcgtatcgctatcgcgcgtgctttactacggaactgcccg
atattgattttggatgaagcgacttcggcgctggatacagaatcagagcgagctattcag
gccgctttagatgagttacaaaaaaaccgaacttctctggtgatcgcccatcgcttatcc
actatcgagaaagcagatgagatcgtggtcattgaagacgggcgtattgtggagcgtggt
gtacacgctgaattgctggtccagcaaggtgtctatgcgcagctcaaccgtatgcagttt
ggccaatga
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