Yersinia pestis D106004: YPD4_2313
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Entry
YPD4_2313 CDS
T01832
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ypd
Yersinia pestis D106004
Pathway
ypd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ypd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
YPD4_2313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ypd03019
]
YPD4_2313
03009 Ribosome biogenesis [BR:
ypd03009
]
YPD4_2313
03036 Chromosome and associated proteins [BR:
ypd03036
]
YPD4_2313
Enzymes [BR:
ypd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
YPD4_2313
Messenger RNA biogenesis [BR:
ypd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
YPD4_2313
Ribosome biogenesis [BR:
ypd03009
]
Eukaryotic type
90S particles
RNase
YPD4_2313
Prokaryotic type
rRNA processing factors
YPD4_2313
Chromosome and associated proteins [BR:
ypd03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
YPD4_2313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
DND1_DSRM
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
ACY59220
LinkDB
All DBs
Position
complement(2963954..2964568)
Genome browser
AA seq
204 aa
AA seq
DB search
MLQALTHRSASSKHNERLEFLGDSILSFVIANELYRRFPRVDEGDMSRMRATLVRGNTLA
EMAREFDLGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIHTIERLILEWYHS
RLEEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVRGEAHDQEFTIHCQVSGLNEPVI
GTGSSRRKAEQAAAEQALKQLELE
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
ttgctgcaagcactgactcatcgtagcgccagcagcaaacacaatgagcgtttggagttc
ctgggtgactctatattaagttttgttatcgccaatgagctatatcgccgtttccctcgc
gttgatgaaggggatatgagtcgtatgcgggccacattggttagagggaatacacttgcc
gaaatggcccgtgaatttgaccttggcgaatgtttacgccttgggccgggtgaattgaag
agtggtggttttcgccgcgaatcaattttagccgatacggtagaagccttaattggcggt
gtattcttagatagcgatatccatacgattgaacggctgatcctcgagtggtatcacagt
cggttagaggaaatcagccctggtgataagcagaaagacccaaaaacgcgcttgcaagag
tatttgcagggccgtcatctgccattaccttcatatctggtcgtgcaggttcgcggcgaa
gcacatgaccaggaatttactatccactgccaggtgagtggcttgaatgaaccagtaata
ggtactggctcaagccgtcgtaaagctgagcaggcggcagcggaacaagcgctgaaacag
ttggagcttgaatga
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integrated database retrieval system
