Yersinia pestis D106004: YPD4_2940
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Entry
YPD4_2940 CDS
T01832
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
ypd
Yersinia pestis D106004
Brite
KEGG Orthology (KO) [BR:
ypd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ypd03021
]
YPD4_2940 (rpoS)
Transcription machinery [BR:
ypd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
YPD4_2940 (rpoS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ACY59844
LinkDB
All DBs
Position
complement(3735045..3736043)
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AA seq
332 aa
AA seq
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MSQSTLKVNELHEDADFDENSTETEIFDEKALVDDEPTESELADDELLAQGVTQRVLDAT
QLYLGEIGYSPLLTAEEEVYFARRALRGDVSSRRRMIESNLRLVVKIARRYSNRGLALLD
LIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVY
LRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDIL
SDENENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLT
RERVRQIQVEGLRRLREILQTQGLSIEALFRE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaagtacgctgaaagttaacgagttgcatgaagatgctgattttgatgagaac
agtacggaaactgagatttttgatgaaaaagcattagtagatgatgaacctactgaaagc
gagttagcagacgatgagttgttggcgcaaggtgttacccagcgtgtgctggatgcgacg
caactctatcttggtgaaatcggttattcgccactgctaacggccgaagaagaggtttat
tttgcccggcgtgcattgcgcggagacgtatcttcacgtcgacgtatgattgagagtaac
ttacggctggtggtgaagatcgcccgccgttacagtaatcgcggtttagcgctgttggat
ctgatagaagagggtaacctcggtttgatccgtgcggtggaaaagtttgatcctgaacgc
ggtttccgtttttccacttacgcgacttggtggattcgccaaacgattgaacgggcgatt
atgaaccaaacccgtaccatccgtttgcctatccatattgttaaagaattaaacgtttat
ttacgcacagcacgagagctttctcataaattggatcatgaaccgagcgcggaagagatt
gcagagcaactcgacaagccggtcgatgatgtgagccgtatgttacgccttaacgaacgt
atcacttctgttgatacacctttaggcggcgactcagagaaagcgttgttggatattctg
tctgacgaaaatgagaacggtccggaagatacaacacaagatgacgatatgaaacagagt
atcgttaagtggttgtttgaattgaatgcaaaacagcgcgaagtgttggcccgtcgtttt
ggtctgttaggatatgaagcggcaacattggaagatgttggccgagaaattggtttgaca
cgcgagcgtgttcgccagattcaggttgaaggcttacgccgtctgcgggaaatcctgcaa
acgcaaggcctgagcatcgaggcgttgttccgcgaataa
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