Yersinia pestis D106004: YPD4_3069
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Entry
YPD4_3069 CDS
T01832
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ypd
Yersinia pestis D106004
Pathway
ypd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ypd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YPD4_3069 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ypd03019
]
YPD4_3069 (pnp)
03016 Transfer RNA biogenesis [BR:
ypd03016
]
YPD4_3069 (pnp)
Enzymes [BR:
ypd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
YPD4_3069 (pnp)
Messenger RNA biogenesis [BR:
ypd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
YPD4_3069 (pnp)
Transfer RNA biogenesis [BR:
ypd03016
]
Prokaryotic type
tRNA degradation factors
YPD4_3069 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
KH_2
OB_RRP5_4th
aRib
UPF0181
Spt6_S1
KH-I_KHDC4-BBP
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ACY59973
LinkDB
All DBs
Position
complement(3889227..3891221)
Genome browser
AA seq
664 aa
AA seq
DB search
MTVVGQKKAKPGQSFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRP
LFPDSFLNEVQVIATVVSVNPQINPDIVALIGASAALSLSGIPFNGPIGAARVGFINDQY
VLNPTTDELKESRLDLVVAGTAGAVLMVESEADILSEEQMLGAVVFGHEQQQVVIENINA
LVAEAGKPKWDWQAEPVNEALHARVAELAEARLGDAYRITEKQERYTQVDAIKADVTEAL
LAQDDTLDAAEIQDILASVEKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGILPRTHGSA
LFTRGETQALVTATLGTARDAQNIDELMGERTDSFLLHYNFPPYCVGETGMVGSPKRREI
GHGRLAKRGVLAVMPSASEFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAV
AGIAMGLVKEGDNFVVLSDILGDEDHLGDMDFKVAGSRDGVTALQMDIKIEGITREIMQV
ALNQAKGARLHILGVMEQAISTPRGDISEFAPRIYTMKINPEKIKDVIGKGGSVIRALTD
ETGTTIEIEDDGTIKIAATDGDKAKHAIRRIEEITAEIEVGRIYAGKVTRIVDFGAFVAI
GGGKEGLVHISQIADKRVEKVTDYLQMGQDVPVKVMEVDRQGRIRLSIKEATTPDAEAPE
AAAE
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
gtgactgttgttggtcaaaagaaagccaaaccaggccagagtttcttccctctgacggtt
aactatcaggagcgtacttacgctgctggccgtatcccaggtagcttcttccgtcgtgaa
ggccgcccaagtgaaggcgaaacactgacttcacgtctgatcgaccgcccaattcgccca
ctgttcccagacagcttcctgaacgaagttcaagtgattgcaaccgtcgtttcggttaac
ccacaaattaacccagacatcgtggcactgattggtgcatctgcggcactgagcttgtca
ggcattccatttaacggcccaatcggtgctgctcgcgttggttttatcaacgaccagtat
gtgctgaacccaaccactgacgagctgaaagagagccgtttggatctggttgttgccggt
actgcgggtgcagtgctgatggttgaatcagaagccgatattctgtccgaagagcaaatg
ttgggcgcggtcgtcttcggccacgaacaacagcaagttgtgattgaaaatattaacgct
ttggttgctgaagctggcaaacctaagtgggattggcaggcagagcctgtcaacgaagca
ctgcatgcgcgtgttgctgaactggccgaagcgcgtctgggcgatgcataccgtatcact
gaaaaacaagaacgttatacgcaagttgatgctatcaaagctgacgtgaccgaagcgcta
ttagcgcaggacgacacattagatgccgctgaaattcaggatatcctggccagcgttgag
aaaaatgttgtgcgtagccgtgtgctgcgtggtgagccacgtatcgatggtcgcgaaaaa
gacatgatccgtggtttggatgtacgtactggcatcttgccacgtactcatggttctgcc
ttgttcacccgcggtgaaactcaggcgttggttaccgctacgctgggtacggcacgtgac
gcacaaaacattgatgagttgatgggtgagcgcacagattcattcctgttacactataat
ttccctccgtattgtgtaggcgaaacagggatggttggctcacctaagcgtcgtgagatt
ggccatggccgccttgcgaaacgtggtgttctggctgtgatgccaagtgcgagcgagttc
ccttacactattcgtgtggtttctgaaatcaccgagtctaatggttcttcctcaatggct
tctgtttgtggtgcttctctggctctgatggatgcgggcgtgccaattaaagccgctgtt
gctggtattgcaatgggcctggtaaaagagggtgataactttgtcgttctgtctgacatt
ctgggtgacgaagatcacttgggcgacatggactttaaagtagccggtagccgtgacggt
gtgaccgcactgcaaatggacattaaaattgaaggtattacccgcgaaattatgcaggta
gctctgaatcaggctaagggtgcacgtttgcacattctgggcgtgatggaacaggctatc
agcacaccacgtggcgatatctctgagtttgctccacgtatctacaccatgaagatcaac
cctgagaaaatcaaggatgtgatcggtaaaggtggttcggtgatccgtgcgctgactgat
gaaactggcaccacgattgaaatcgaagatgatggtaccattaagattgcagcaactgat
ggcgataaagcaaaacacgctatccgtcgtatcgaagagattactgctgaaatcgaagtg
ggccgtatttacgcaggtaaagtcacccgtatcgttgatttcggtgcatttgttgctatc
ggtggcggtaaagaaggtctggtacatatttctcaaatcgctgataagcgtgtagagaaa
gtgacagactacctgcagatgggtcaagatgtgccagttaaagtaatggaagttgatcgt
cagggccgtatccgcctgagcatcaaagaagccactactcctgacgcagaagcaccagaa
gcagcagcagagtaa
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