Yersinia pestis D106004: YPD4_3291
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Entry
YPD4_3291 CDS
T01832
Symbol
thiC
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ypd
Yersinia pestis D106004
Pathway
ypd00730
Thiamine metabolism
ypd01100
Metabolic pathways
ypd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ypd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
YPD4_3291 (thiC)
Enzymes [BR:
ypd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
YPD4_3291 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ACY60195
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Position
4177455..4179500
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AA seq
681 aa
AA seq
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MSNNTTSLPAENSSHPRKGTPIRKKQREEAQQFINTLQGVTFPNSQRIYLQGSRPDIQVP
MREIQLSPTQIGGSKNEPRYEDNEAIPVYDTSGPYGDPQAKLDVHNGLPKLRAAWVADRQ
DTEALASVSSGFTQQRLADEGLDHLRFEHLPRPRKAATGQCVTQLHYARQGKITPEMEFI
ALRENMGRERIRGEVLLQQHPGQAFGAHLPENITAEFVRQEVAAGRAIIPANINHPESEP
MIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILR
NSPVPIGTVPIYQALEKVNGVAENLTWEMFRDTLLEQAEQGVDYFTLHAGVLLRYVPMTA
KRLTGIVSRGGSIMAKWCLSHHQENFLYQHFREICQICAAYDVSLSLGDGLRPGSIQDAN
DEAQFAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPL
TTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAAD
LAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPATARAYHDETLPQESGKVAHFCSMCG
PKFCSMKISQEVRDYAAAQEQAAAQAQAATPTTAAQPIDITQPINMLQSGMEKMSAEFRS
RGSELYHRPANLSAEANNEPT
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataatacaacgtcattacccgctgaaaattcgtcacacccacgtaaaggcaca
cctattcgtaaaaagcagcgcgaagaggcccaacagtttattaataccttacaaggcgtt
acttttcccaactcccaacgtatttatctacaaggctctcggcccgatattcaagtgccg
atgcgtgaaatccaactcagcccgacgcaaatcggcggcagtaaaaacgaaccacgctat
gaagataatgaggccatcccggtctatgacacctccggtccctatggtgacccacaagct
aaactggatgttcataacgggctgcctaaactgcgtgccgcttgggtcgcagatcgccaa
gatactgaagcgctggcatctgtcagttccggctttacccaacagcgtttggctgatgaa
ggcctggaccatttacgttttgagcatctaccccgcccacggaaagcagccactggtcaa
tgtgtgactcagttgcattacgcccgacaggggaaaatcacgccagagatggagtttatc
gccctacgggaaaatatgggccgtgaacgtattcggggtgaagtcttgcttcaacaacat
ccgggacaagcgtttggtgcccatctgccggaaaatatcaccgccgagtttgtgcgtcag
gaagtggcggccggccgagccatcatccccgccaatattaatcacccagaatctgaacca
atgattattggccgtaattttctggtcaaagtgaatgccaacatcggtaattccgccgtg
acctcttccattgaagaagaggtagaaaaactggtctggtctacccgttggggtgccgat
acggtgatggacttatctacgggccgctatattcatgaaacgcgggaatggatcctacgt
aacagcccggtccctattggcacggtacctatctatcaggcgctggaaaaagttaatggc
gtggccgaaaatctgacctgggaaatgttccgtgacaccctgttagagcaggcagagcaa
ggggtagactattttactctccacgcgggggtcttgttgcgctatgtgccgatgactgcc
aaacgcctaaccggtatcgtctctcgcggcggttcaattatggcaaaatggtgcctttcg
catcatcaggaaaacttcctgtatcagcatttccgcgaaatctgtcagatttgtgcagcc
tatgacgtttcattatcactgggcgatggcctgcgccctggctctattcaagatgccaat
gatgaggcccaattcgccgaactgcataccttgggtgaattgaccaaaatcgcctgggag
tatgatgtacaggtgatgatcgaaggcccagggcatgtgccgatgcagatgatccgccgc
aatatgaccgaggaactggaacactgccacgaagcgccattttataccttaggcccactg
accacggacatcgcaccgggctatgaccactttacctcagggattggtgcagcgatgatc
ggctggttcggttgcgccatgctctgttatgtcacccccaaagagcaccttggtctgccg
aataaagaggatgtcaaacaggggcttattacttacaaaattgccgcgcacgccgcagat
ttggctaaaggccaccccggtgcgcaaattcgtgataacgccatgtccaaagctcgcttt
gagttccgctgggaagatcaattcaatttggcgcttgatccagcaacagcccgcgcttac
cacgatgaaaccttgccgcaagagtccgggaaagtcgctcatttttgttccatgtgcggc
ccgaaattctgttcaatgaaaatctcacaagaggtccgcgattatgctgcggcacaagaa
caagcggccgcacaagcacaagccgctacaccaaccaccgcagcacaaccaatagacatc
acgcagccaattaatatgctgcaatcagggatggaaaaaatgtcggccgagtttcgctcc
cgtggcagtgagctataccaccgcccggcgaatctgagtgcggaggccaataatgagcca
acttga
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