Yersinia pestis D106004: YPD4_pCD0018
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Entry
YPD4_pCD0018 CDS
T01832
Symbol
yopB
Name
(GenBank) secreted effector protein
KO
K23475
transloator
Organism
ypd
Yersinia pestis D106004
Pathway
ypd05135
Yersinia infection
Brite
KEGG Orthology (KO) [BR:
ypd00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05135 Yersinia infection
YPD4_pCD0018 (yopB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ypd02000
]
YPD4_pCD0018 (yopB)
Transporters [BR:
ypd02000
]
Other transporters
Pores ion channels [TC:
1
]
YPD4_pCD0018 (yopB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SseC
DUF677
DUF2207_C
DUF6040
CENP-K
Cep57_MT_bd
DUF6279
Myotub-related
HisK-N-like
Motif
Other DBs
NCBI-ProteinID:
ACY60557
LinkDB
All DBs
Position
pCD1:complement(18274..19347)
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AA seq
357 aa
AA seq
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MSSQGVQLPAPLAVVASQVTEGQQQEVTKLLESVTRGAAGSQLISNYVSVLTKFTLASPD
TFEIELGKLVSNLEEVRKDIKIADIQRLHEQNMKKIEENQEKIKETEENAKQVKKSGIAS
KIFGWLSAIASVIVGAIMVASGVGAVAGAMMVASGVIGMANMAVKQAAEDGLISQEAMKI
LGPILTAIEVALTVVSTVMTFGGSALKCLANIGAKLGANTASLVAKGAEFSAKVAQISTG
ISNTVGSAVTKLGGSFAGLTMSHAIRTGSQATQVAVGVGSGITQTINNKKQADLQHNNAD
LALNKADMAALQSIIDRLKEELSHLSESHQQVMELIFQMINAKGDMLHNLAGRPHTV
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
gtgagttctcagggcgtacagctccctgcaccactagcagtggttgccagccaagttact
gaaggacaacagcaagaagtcactaaattattggagtcggtcacccgcggcgcggcagga
tctcaactgatatcaaattatgtttcagtgctaacgaagtttacgcttgcttcacctgat
acatttgagattgagttaggtaagctagtttctaatttagaagaagtacgcaaagacata
aaaatcgctgatattcagcgtcttcatgaacaaaacatgaagaaaattgaagagaatcaa
gagaaaatcaaagaaacagaagagaatgccaagcaagtcaagaaatccggcatcgcatca
aagatttttggctggctcagcgccatagcctcagtgattgtcggtgccatcatggtggcc
tcaggggtaggagccgttgccggtgcaatgatggttgcctcaggcgtaattgggatggcg
aatatggcagtgaaacaagcggcggaagatggcctgatatcccaagaggcaatgaaaata
ttagggccgatactcactgcgattgaagtcgcattgactgtagtttcaaccgtaatgacc
tttggcggttcggcactaaaatgcctggctaatattggcgcaaaactcggtgctaacacc
gcaagtcttgtggctaaaggagccgagttttcggccaaagttgcccaaatttcgacaggc
atatcaaacactgtcgggagtgcagtgactaaattagggggcagttttgctggtttaaca
atgagccatgcaatccgtacaggatcacaggcaacacaagtcgccgttggtgtgggcagc
ggaataactcagaccatcaataataaaaagcaagctgatttacaacataataacgctgat
ttggccttgaacaaggcagacatggcagcgttacaaagtattattgaccgactcaaagaa
gagttatcccatttgtcagagtcacatcaacaagtgatggaactgattttccagatgatt
aatgcaaaaggtgacatgctgcataatttggccggcagaccccatactgtttaa
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