KEGG   Yersinia pestis D106004: YPD4_pCD0038
Entry
YPD4_pCD0038      CDS       T01832                                 
Symbol
yscC
Name
(GenBank) outer membrane secretin precursor
  KO
K03219  type III secretion protein C
Organism
ypd  Yersinia pestis D106004
Pathway
ypd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ypd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    YPD4_pCD0038 (yscC)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ypd02044]
    YPD4_pCD0038 (yscC)
Secretion system [BR:ypd02044]
 Type III secretion system
  Type III secretion core apparatus
   YPD4_pCD0038 (yscC)
SSDB
Motif
Pfam: Secretin Secretin_N LnmK_N_HDF
Other DBs
NCBI-ProteinID: ACY60577
LinkDB
Position
pCD1:36202..37614
AA seq 470 aa
MAGRPDASNRLVYVSGPPRYLELVEQTAAALEQQTQIRSEKTGALAIEIFPLKYASASDR
TIHYRDDEVAAPGVATILQRVLSDATIQQVTVDNQRIPQAATRASAQAKVEADPSLNAII
VRDSPERMPMYQRLIHALDKPSARIEVALSIVDINADQLTELGVDWRVGIRTGNNHQVVI
KTTGDQSNIASNGALGSLIDARGLDYLLARVNLLENEGSAQVVSRPTLLTQENAQAVIDH
HETYYVKVTGKEVAELKGITYGTMLRMTPRVLTQGDKSEISLNLHIEDGNQKPNSSGIDG
IPTISRTVVDTVARVGHGQSLIIGGIYRDELSVALSKVPLLGDIPYLGALFRRKSELTRR
TVRLFIIEPRIIDEGIAHHLALGNGRDLRTGILAVDEISNQSTTLNKLLGGFQCQPLNKA
QEVQKWLSQNNKSSYLTQCKMDKSLGWRVVEGACTPAESWCVSAPKRGVL
NT seq 1413 nt   +upstreamnt  +downstreamnt
ttggctgggcgccctgatgctagcaaccgccttgtttacgtctctggtcctcctcgttat
cttgaattggttgaacagaccgcagccgcattggaacaacagacgcaaattcgcagtgaa
aaaacaggggcattagcgattgagattttccctctcaaatatgcatcagcgagcgatcga
actattcattaccgtgatgacgaagtggctgctcctggggttgcaacgatacttcaacgc
gtgttaagcgatgccacaatccaacaagtgacagtggataatcagagaataccgcaggcc
gctacccgggcttcagctcaagccaaggttgaagcggatccatcgctcaatgcgataata
gtgcgcgattctcctgagcgtatgccaatgtatcaacggttaattcatgcgcttgataaa
cctagcgctcgtattgaagtggcgttatccattgtcgatataaatgccgaccaacttact
gaattaggtgtggactggcgagttggcattcgtactggcaacaatcatcaggtggtaata
aaaacaaccggggatcaaagtaacatcgcttcaaacggtgcattgggtagtttgattgat
gctcgcgggcttgactacctattagcaagagtcaatttacttgaaaatgaaggttcggct
caagttgtttcacgtccgaccctgctaacacaagaaaatgcccaagcggtgattgatcac
catgaaacctattacgtcaaagtgacaggtaaagaagtggctgaactgaaagggatcacc
tacggcactatgctgcgtatgacaccaagggtgctgactcaaggagataagtcagaaatc
agtctcaatctacacattgaggatgggaaccaaaaaccgaatagttcagggattgacgga
atccccactatcagtcgtacggtcgttgatactgtcgctcgcgtgggacatggccagagt
ttgattattggtggtatttatcgtgacgaattgagtgttgctcttagtaaggtgcctttg
cttggtgatattccttatcttggcgcacttttccgccgtaaaagtgagttaactcgccgt
acggtacggctgtttatcatcgaaccacggattattgacgaaggtattgcgcatcattta
gcgttaggtaatggtcgggatctacgtactggtatcttagctgttgatgaaatatctaat
caaagcactaccttgaataagttattaggtggcttccagtgtcagcctttaaacaaagcg
caagaagtgcagaaatggctgagtcaaaacaataaatcatcctatcttactcagtgcaag
atggacaaaagtttgggatggcgcgtggttgaaggtgcttgtactcccgcggaatcatgg
tgtgtttcagcgcctaagcgtggcgtattgtga

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