Yersinia pestis D106004: YPD4_pCD0067
Help
Entry
YPD4_pCD0067 CDS
T01832
Name
(GenBank) transposase
Organism
ypd
Yersinia pestis D106004
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
rve
rve_3
HTH_23
HTH_7
HTH_29
LacI
MerR
HTH_Tnp_ISL3
Sigma70_r4_2
HTH_28
HTH_11
GerE
Motif
Other DBs
NCBI-ProteinID:
ACY60539
LinkDB
All DBs
Position
pCD1:complement(join(67415..68342,1..221))
Genome browser
AA seq
382 aa
AA seq
DB search
MIKQMRQQGAYIIDIATQVGCSERTVRRYLKYPEPPARKTRHKMVKLKPFMDYIDMRLAE
NVWNSEVILAEIKAMGYTGGRSMLRYYIQPKRKMRPSKRTVRVETQPGYQLQHDWGEVEL
EVAGQRCKVNFAVNTLGFSRRFHVFAAPKQDAEHTYESLVRAFRYFGGSVKTVLVDNQKA
AVLKNNNGKVVFNSGFLLLAEHYDFLPRACRPRRARTKGKVERMVKYLKDNVFVRYRRFD
SFTHVNQQLEQWMADVADKRELRQFRQTPEQRFALEQEHLQPLPDTDFDTSYFDIRHVSW
DSYIEVGGNRYSVPEALCGQPVSIRISLDDELRSYSNEQQVASHRLCSASSGWQTVPEHH
APLWQQVSMVEHRPLSAYEELL
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgataaagcaaatgcgccagcagggggcgtacattatcgatattgcgactcaggtgggt
tgctctgaacgaactgtcagacgctacctcaaataccctgaaccgccagccagaaagact
cgccacaaaatggttaagctgaaaccgtttatggactacatcgacatgcgcctggcagag
aatgtctggaatagcgaggtcatcctcgcggaaattaaggcgatgggctataccggcggg
cgttccatgctgcgttactacatccagcccaaacgtaaaatgcggccatcaaaaagaacg
gttcgcgtcgaaacccagccgggatatcagctccagcacgactggggcgaagtcgagcta
gaggttgctgggcaacggtgtaaagttaacttcgcggttaatacgctggggttctcccga
cgcttccatgtcttcgctgcgccaaagcaggatgctgaacacacctatgagtcgctggtc
cgtgccttccgttacttcggcggcagtgtgaaaaccgtgctggttgataaccagaaagcc
gcggtgctgaaaaataacaacggaaaagtggtgttcaactccgggttcctcttgttggcc
gaacattatgacttcctgccacgggcctgccgcccgcgcagggccagaaccaaaggtaag
gtggagcggatggtgaaatatcttaaggataacgtcttcgtccggtaccgcaggttcgac
agcttcacccatgttaaccaacagctggagcagtggatggcggatgttgctgataaacgc
gagcttcgccagttcagacaaacaccggaacagcgcttcgcgctggaacaggagcatctg
cagccgttgccggatacggacttcgataccagctacttcgacatccgccatgtgtcctgg
gacagctatatcgaggttggcggcaatcgttacagtgttcccgaggctctgtgcgggcaa
ccagtctcgatacgtatatcgctggatgacgagctgcggagctacagtaatgagcagcag
gtggcctcacatcgactctgttcagcatcgtctggctggcagactgtgccggagcaccac
gccccgctctggcaacaggtcagcatggtagaacatcgcccactgagtgcttatgaggag
ttgctgtga
DBGET
integrated database retrieval system
