Yersinia pestis D106004: YPD4_pMT0006
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Entry
YPD4_pMT0006 CDS
T01832
Name
(GenBank) host specificity protein J
Organism
ypd
Yersinia pestis D106004
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_Tail_Tip
Phage-tail_3
FNIII-A_GpJ
fn3
ApoLp-III
Motif
Other DBs
NCBI-ProteinID:
ACY60611
LinkDB
All DBs
Position
pMT1:complement(6536..11167)
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AA seq
1543 aa
AA seq
DB search
MEQFKKKRLPLLIAGAGGKKSSGSSRTPVEADDTVNSRAMASILDLLGEGVIGGLVDGAK
SIFVDDLPILNEDGSSNFSGITWDFRDGSQDQTPMAGFDFVETPKSVNIQLKRMHDVTIA
IDNDEADRVRVILKFPSLRSIDKKTGDTNGTTVKYKFQIANGDNAFKDAIAEGESASEIA
LTAKKTGVYYRSYELKLPKPGRAYKVRVLRLTDDSNTQYIFNDTWVDSIGEIVDTPMNYP
NSALVGLKVNSEQFGSSMPSRSYLVRGLKIRVPSNYDEHTNTYIGVWDGTFKLLSSSNPA
WILFDLLTNARYGLGQYVSESMIDLGQIYQIGRYCDEEIDNGFGGKEKRFAINTQITSRQ
DAYRLIQDIAGAFRGMVFWAGGMVNVMQDSPSDPVMMFTNANVKDGMFSYKGSARKDRPS
VALVTYNNKEDGYKQNIEYVEDQEAMRRYGERKTEVVAFGCTSRGQAHRVGLWLLYTARM
ESDVISFTAGLDASFLMPGETVLIQNKYRAGKRNSGRIVAFTKNSITLDAPVTLNKAGSY
IRILNQEGEIVERDILETGEDITKVTFSKALNSGDMPVMNGVWTITEPDLEPMRVRVINV
AQGEAQGTFNVTVVQNNASKYEAIDNGATLIPENNTVLDPTYSKPTNLQVTEGTYISSPG
NLSIKLVATWEGKSAEYWISWRRSDENNVSNWQSARVTEEQFEILNIAENGQYDIQLYAV
SFSGKKTDIISTVYQVKGTMTPPGSPTSLTAVGDYRNVILNWVNPDSIDLDHINVYASQT
NDLETAKLVAEAASTTFTHAGLGDSETWYYWVRAVNKRGMLSPPNSNLGTEAMTRDVLSF
LTGKITSSELGQELLEEIDAKASQDAVDAINKQMEESLKELDQSVADLDSKLEDTSGRLE
QVQNDLKNEVSGTLDKVNDALQQVEDSNAALVELQETVSEQGKAIAGAVEAAHAALDNAS
ALIAEEREARVEGDKANAKQIEAMKSSVDDSVAAVEEMKKTVAEVERASAEASTNIEALA
KTNIDLALRQDEDQHKQMVNNAKIATTQKTFADDMSAMASKVEEIRAEIGEDIRASILEE
TTARVEADKTIATHISKLEAQLNDDISAAIVSEQEARATADETLSRQITTLQAKVEGDIS
AALTEEQIARATADEALSKQITQLKAQNGEDIKAAVAEETQARTDADGALASQISSLKAQ
TAEDIKAAVDTETKARTDADSALAGQITNLQAQTGKDINAAITSEATARANADGALGKRI
DTVKAEVDGNSALIQQQAKAIADTDKKVSAAWTLKMETSTSGGQKYVAGIALGIDSTGLS
QFLVQADRFGLVNSVNGKITTPFVIENSVAYMNGAYIKDGTITNAKIGNVIQSNDYAAGS
RGWIIPKDGSPEFNNGTFRGNIAANSGTLNNVTIAQNCQILGKLHANQIDGDIVKAYMVN
GSSIYIAPQTFARIIYVVNGYYYNKPSEDINTYSWSRITEYTVNGVKQQIYGMREGSKNQ
SGLFGYYNLPAGQSATVDVYTWHRQRKYDHRVNEPYLILVFKA
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atggaacagttcaagaagaagagactgcctctcctgattgcaggtgctggcggtaagaaa
agcagtggctccagccgcacaccggttgaagccgacgataccgtaaactcgcgtgctatg
gcgtccatcctcgacctgctcggggaaggtgtcattggcgggctggtggatggtgcaaag
tcgatcttcgttgatgatctgccaatccttaacgaagacgggtcttcaaactttagcggt
atcacctgggacttccgcgatggttcacaagaccagacgccgatggctgggttcgatttc
gttgaaacgccgaagtcagtcaacatccagttgaaaagaatgcacgacgttacgattgcc
atcgataacgatgaggcagaccgtgtccgcgtcattctgaagttcccgtctctgcgtagc
atcgacaaaaagaccggtgataccaacggtacgaccgtgaagtacaaattccagattgcc
aatggcgataatgccttcaaggacgccatcgcagaaggggagagtgcttccgaaattgcg
ctgacggcaaaaaagacaggcgtctactaccgcagctatgagctaaaactgcccaagcca
ggtcgtgcctacaaggttcgcgtgctgcgtctgaccgatgacagcaatactcagtacatc
tttaacgatacgtgggtggactctatcggtgagatcgtcgatacgccgatgaactatccg
aactccgcgctggttggcctcaaggtcaactcagagcagttcggcagctcgatgccgtct
cgttcgtatctggtgcgtggcctgaagatccgcgtaccgtccaactacgatgaacacaca
aacacctatatcggcgtatgggatggcacattcaagctgttgtcatcttccaaccctgcc
tggattctcttcgacctgcttaccaacgctcgttatggcctggggcagtacgtttctgag
tccatgattgacctcgggcagatctaccagattggtcgctactgtgacgaagaaattgac
aatggattcgggggcaaagagaagcgcttcgctatcaacacccagatcactagccgtcag
gacgcgtaccgactgattcaggatatcgctggcgccttccgcggtatggtcttctgggct
ggtggcatggttaacgtcatgcaggatagtccgtcagatccggtcatgatgttcaccaac
gcgaacgtcaaagacggcatgttcagctacaagggatctgcgcgtaaagaccgtccgtca
gtagctcttgtgacctacaacaacaaggaagacggctacaagcagaacatcgagtacgtc
gaagaccaggaggcgatgcgtcgttatggcgagcgtaaaaccgaagtggttgcgttcggc
tgtacaagccgtggccaggcgcatcgtgtcggtctgtggctgctgtataccgcacgcatg
gagtcggacgttatcagctttacggcagggcttgatgcttccttccttatgccgggtgaa
acggtgctgattcagaacaaataccgtgctggtaaacgcaactctggccgcattgtggcg
ttcacaaagaacagcatcactctcgacgcaccggttacgctgaataaagccggtagctac
atccggatcttgaatcaggaaggcgaaatcgttgagcgcgatattcttgagaccggggaa
gacattaccaaagtgaccttctccaaagcgctcaattccggtgatatgccggtgatgaat
ggcgtctggacgattaccgagccagatctggagccaatgcgcgtgcgtgttatcaacgtt
gcccagggcgaggctcaggggacgtttaacgttacggttgtccagaataatgcatcgaag
tacgaagccatcgacaacggtgcgacgctgatccccgagaacaacacagttctcgacccg
acttattcgaagccgactaacctgcaggtgacggaagggacgtatatctccagtccgggt
aacctctcaatcaagctcgtagccacctgggagggtaagtctgcggaatattggatcagc
tggcgtcgttccgatgaaaacaacgtttctaactggcagtccgcacgcgttaccgaagag
cagttcgagatcctcaatattgctgagaatggtcaatacgacattcagctctatgcggtt
tcgttcagcggcaagaaaacggacatcatcagcaccgtttatcaggtgaaaggtacgatg
acgccgccaggctctcctacctctctgacggccgttggtgactaccgcaacgtgattctg
aattgggtcaacccggactcaatcgaccttgatcacatcaacgtgtatgcctcccagacc
aacgatctggaaacggcgaagttggttgcagaggccgccagcaccacgttcactcatgcc
ggtctgggagatagtgagacctggtactattgggttcgcgcggtgaacaagcgtggcatg
ttaagtccgccgaactccaatctgggtacggaagcgatgacgcgagacgtcctctcgttc
cttaccgggaagatcacctcttccgagctggggcaggagctgctggaggaaatcgacgct
aaagcctctcaggatgcggtcgacgccatcaacaaacagatggaagagagtctgaaagag
cttgatcagtccgttgccgatctggacagcaaactggaagacaccagcggtcggcttgag
caggtgcagaacgacctcaaaaatgaagtctctggcacgctggacaaggtcaacgacgcg
ctgcaacaagttgaggactctaatgcggctctggtcgagttgcaggaaaccgtttccgag
cagggcaaagccatagctggcgctgtggaagcggcgcacgctgcgctcgacaacgcctcc
gcgctgattgctgaagagcgtgaagcccgtgtcgaaggtgataaggcaaatgccaaacag
attgaggcaatgaaatcctccgtcgatgacagtgttgccgccgtcgaagagatgaaaaag
accgttgccgaagtcgaacgcgccagcgcggaagcgtcgaccaatatcgaggctctggcc
aaaaccaatattgacctcgctctgcgtcaggatgaagaccagcacaagcagatggtcaat
aatgcgaagatcgcaaccactcagaagacgtttgccgacgatatgtctgcaatggcctca
aaagtggaagaaatccgcgcagaaattggtgaggacatccgggcgtcgattctggaagag
acaacggctcgcgtagaggctgacaagacaattgcgacgcatatctccaagctggaagcc
cagctcaacgacgatatttcagcggcaatcgtttccgagcaagaggcgcgtgcgactgcg
gatgaaacgctttctcgtcagatcaccacgttgcaggcgaaagttgaaggtgatatcagc
gctgcacttactgaagagcagattgcccgagccacagcggatgaggcgctatcgaagcaa
attacccaactgaaggcacagaatggtgaggatatcaaagccgccgttgcagaagagacc
caggctcgaaccgatgcagatggtgctctggcttcgcagatcagctcgctgaaggctcag
acggcagaggacatcaaggccgctgtcgacacagagacgaaagcgcgtaccgatgccgac
tctgctctggccgggcagatcaccaatctccaggctcagaccggcaaagatatcaacgct
gctatcacatccgaagccaccgcgcgtgcaaacgctgacggtgctctcggtaagagaatt
gatacggttaaggctgaagttgatggcaactcggctctcattcagcagcaagcgaaggcg
attgccgataccgataagaaggtttctgctgcctggacgctgaagatggaaacatctacc
agcggcgggcagaagtacgttgcaggtatcgcgctgggtatcgacagtaccggtttatca
caatttttggtgcaggcagaccgttttggcctggtcaactccgtaaacgggaagatcact
acgccatttgtcatcgaaaacagcgtggcgtatatgaacggcgcttatatcaaagacggc
acaattacgaacgccaaaattggtaatgtcattcagtcgaacgattacgccgcaggcagt
agaggctggattatccccaaagatggtagccctgagttcaacaacggtacgttcagggga
aatattgctgcaaactccggcacgctgaataacgtcaccatcgcgcagaactgccagatt
ctggggaaactgcacgcgaaccagattgatggcgatattgttaaagcctacatggttaat
ggcagcagtatttatattgcacctcaaacattcgccagaattatctatgtggtaaatggt
tactactataacaagccatcggaggatattaacacctactcatggtcaagaattaccgag
tatacggtaaatggagtgaagcagcagatatatggaatgagagaaggctctaaaaatcaa
tctggcttgtttggttattacaatttgccggcaggtcagtctgcgactgttgatgtttat
acctggcatagacagcgtaaatacgatcaccgcgtgaatgaaccttatctcattctggtg
tttaaggcttaa
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integrated database retrieval system
