Yersinia pestis CO92 (biovar Orientalis): YPO1078
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Entry
YPO1078 CDS
T00063
Symbol
dniR
Name
(GenBank) membrane-bound lytic murein transglycosylase D precursor
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
ype
Yersinia pestis CO92 (biovar Orientalis)
Brite
KEGG Orthology (KO) [BR:
ype00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ype01011
]
YPO1078 (dniR)
Enzymes [BR:
ype01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
YPO1078 (dniR)
Peptidoglycan biosynthesis and degradation proteins [BR:
ype01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
YPO1078 (dniR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM_RLK
LysM3_LYK4_5
NMB0315_dom_I
LysM1_NFP_LYK
DUF3071
LysM_OapA
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
CAL19744
UniProt:
Q0WHW6
LinkDB
All DBs
Position
complement(1225664..1227091)
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AA seq
475 aa
AA seq
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MIARLLSNHIDTHMKTKAILLASVLLVGCQTSKQDAQAPEQHAQSLSSAGQASEAGEYTN
STREGSARWLESESSYAQQDLWNFIKDELKMKVPENSRIREQKQKYLKNKSYLHDVTLRA
EPYMYLIVEQIKKRKMPMELVLLPIVESAFDPHATSSANAAGLWQIVPSTGRNYGLKQNQ
WYDGRRDVVASTKAALDILERLNKMFNGDWLLTVAAYNSGEGRVMQAIKANKAKGKPTDF
WALSLPRETSIYVPKMLALGDLLKNSKKYGITLPETDKDRALARVDVDQQIELTQAAEMA
GMSLTKLKSFNSGYKRNVTAPDGHGPRYIMLPKAHAEQLKDSLADTDITAVQPTKLATNS
TKSASSSQYKVRPGDTLSTIAKRLNIKTSDLQSWNNLRAKSTLKVGQTLQLASNTTSKSI
TYQVRKGDSFASIAKRHGVNTDDVMRWNSVVSKANNLQPGLKLTLFVNDKSTPEA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgattgctcgtcttttaagcaaccacattgacacacacatgaagaccaaagcgatactt
ctcgcctcagtcttgcttgtcgggtgccagacgtccaagcaggacgcgcaggctcccgaa
cagcacgcacagagtttgtcttcggcaggtcaagcgagtgaagcaggagagtacacaaat
agcacccgagagggttcagcgcgctggctggaaagtgaaagcagctacgcgcagcaagat
ttgtggaacttcatcaaagacgagctgaagatgaaggttccggagaattcccggatccgt
gaacaaaaacagaaatacttaaaaaataagagctatctccacgatgtaacattacgggca
gagccgtacatgtacctgatagtcgagcagattaagaaacgtaagatgccgatggaactg
gtactgctacccatagtggagagcgcttttgacccacacgcgacatcatccgccaatgcc
gcagggctatggcagattgtgccaagtacggggcgaaattatggcttgaagcaaaatcaa
tggtatgacggtcgcagagatgttgttgcctctaccaaagcagcgcttgatatattggaa
cgcttgaacaaaatgtttaacggtgactggttattgacagtcgcagcttataacagcggt
gaaggccgagttatgcaagcgataaaagccaataaggcaaagggcaaaccgaccgatttt
tgggcattgtcgcttccgcgtgaaacgtcaatttatgttccaaaaatgctggccttgggt
gatttactcaagaacagcaaaaagtacggtataaccttgcctgagactgacaaagaccgt
gcgctggctcgcgttgatgtcgatcaacaaatagagctaactcaggcagctgagatggcg
gggatgtcactgacaaagctgaaatcctttaattctggctacaaacgcaatgtaacggca
ccggatggacatggtccccgttatattatgttaccgaaagcccatgctgagcagttgaaa
gactcattggcagatactgatattactgctgttcaacctacaaaattggcaacgaacagt
acaaaatcagcatcaagttcgcagtataaagttcgcccaggcgataccttatctacgatt
gccaagcggttgaatatcaagaccagcgatttgcagagttggaacaacttacgtgccaag
agcaccttaaaagttgggcaaaccctgcaactggcaagcaatacaaccagcaaaagtatc
acctatcaagttcgtaaaggtgattcctttgccagtattgccaagcgtcacggtgtaaat
accgacgatgtgatgcgatggaattcggtagtcagcaaagctaacaatttacaaccaggc
ttgaaattgacgttattcgttaacgacaaatcaaccccggaggcgtag
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