Yersinia pestis CO92 (biovar Orientalis): YPO1407
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Entry
YPO1407 CDS
T00063
Name
(GenBank) putative exported protein
KO
K21470
L,D-transpeptidase YcbB
Organism
ype
Yersinia pestis CO92 (biovar Orientalis)
Brite
KEGG Orthology (KO) [BR:
ype00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ype01002
]
YPO1407
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ype01011
]
YPO1407
Peptidases and inhibitors [BR:
ype01002
]
Cysteine peptidases
Family C82
YPO1407
Peptidoglycan biosynthesis and degradation proteins [BR:
ype01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
YPO1407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
CAL20059
UniProt:
A0A5P8YGC5
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All DBs
Position
1593938..1595794
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AA seq
618 aa
AA seq
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MSMIKRKLQRALVLYCALVCSLMTVFTASAAAPVMPVDSSSALPARGATMSVAQSRSQLL
AALPKDVVPLYAAELASLYAANQMQPMWQDRVAVQRFQQQLAEVGLSGIQPQFMQWVKWL
SEPEITGMARDIILSDAMLGYLHFISGVGANGSVWLYSNVPYKMAMPPAAVLNAWQKAVN
EGSTASYLASLAPQHPQYDKMQQALKLMLADRRPWPQMPTGPSLRPGQLSDDIPALREIL
DRTGMLHPTTPVKAPEVIPVENPTVAVVNDDLSVDEEKNRTQTNSLVVSPSAVSVPESDD
AAPAPMPPVSVVTLTDNIYTPELVEAVKRFQQWQGLTDDGVIGPRTREWLNVSPQTRATL
LALNIQRLRILPGHVDNGIMVNIPNYSLNYYKDGAEVLSSRVIVGRPSRKTPLMSSALNN
VVVNPPWNVPTSLVRQDIVPKARNDAGYFQRNGYTVLSGWSNDAEVINPSMIDWSIISPN
NFPYRLRQAPGANNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDL
ANMLLQDAGWNDARVSSKVKQGDTTYVNIRQRVPVQLYYLTAWVAEDGKPQFRTDIYNYD
KMVRSGAQISQQAEFLLQ
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgataaaaagaaagttacaacgcgcactcgttttatactgcgctttagtttgc
agcctgatgaccgtgtttactgcatcagccgctgctcccgtaatgcccgtggattcatct
tcagctttgccagcacgtggtgcaaccatgtccgtggctcaaagtcgttcgcaattattg
gccgcgcttccaaaagatgtcgtgccactctatgccgcggaattagcgtcattatatgcg
gcgaaccaaatgcagcctatgtggcaagaccgggttgctgttcaacgttttcagcaacag
ttagcggaggttgggctttcaggcattcaaccgcagtttatgcaatgggttaaatggttg
agcgagccagaaatcaccggtatggcgcgtgatattattctatcggatgcgatgctgggt
tatttacactttatttccggtgtcggtgctaatggcagtgtttggttatacagtaatgtg
ccttacaaaatggccatgccgcctgcagcagttttaaacgcctggcagaaagcggtcaat
gaaggctcgacagcctcttatctggcgtcgttggctccgcagcatccgcaatacgataaa
atgcaacaggcgttgaagttgatgctagcagaccgacgcccgtggccacagatgcctact
gggccaagtttacggccggggcaacttagcgacgatatccctgcattgcgggaaatcctt
gaccgaacgggtatgttgcacccaacaacccccgtgaaagcgccagaggtgatccctgtg
gagaaccctacggtggccgtcgttaatgacgatctctctgttgatgaagaaaaaaatcgg
actcagaccaacagcttggtggtcagcccatcagccgtctctgtccctgagagcgatgat
gcggcacccgcaccgatgcctcccgtgagcgtggtcacgttaactgacaatatctatact
cctgagttggtagaagccgttaaacgcttccagcaatggcaggggctcactgatgacggt
gttatcggcccccgtacccgcgaatggttgaatgtctcgccacaaacgcgggccacgtta
ttggcattgaatatccagcgattacgtattttgccggggcatgttgataacgggattatg
gttaatatcccaaattattctctgaattattataaagatggggccgaagtgctttcatct
cgggtgattgttggccgtccaagtcgtaaaacgcccctgatgagtagtgcgttgaataat
gtggtggtgaacccgccgtggaacgtgccgacctcattggtacggcaggatatcgtgccc
aaagcacgtaacgatgccgggtattttcagcgtaatggctataccgtgttgtccggatgg
agtaatgatgctgaagtgatcaatccttcaatgattgactggagtattatctcgccgaat
aacttcccttaccgtttgcgtcaggcaccaggtgctaataactcgttagggcggttcaaa
tttaacatgccaagttctgatgctatctatttacatgacacgccgaatcatggcctgttc
caaaaggacattcgcgccctgagttcaggttgtgtccgtgtcaataaagcgtctgattta
gcgaacatgctgctgcaagatgctggctggaatgatgcacgggtctcttccaaggtaaaa
caaggtgataccacctacgtcaatatccgccagcgcgttccggtgcaattgtattatctg
acagcatgggttgcggaagacggtaaaccgcagtttagaacagatatttacaattatgat
aaaatggtgcgatctggtgcacaaatctcacagcaggctgagtttttattgcaataa
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